RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 POU4F3Q15319 338 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF74Q16587 644 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 C1QTNF12Q5T7M4 302 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 OR2T5Q6IEZ7 315 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 SEM1Q6ZVN7 128 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ASRGL1Q7L266 308 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 NANOGNBQ7Z5D8 188 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 PXKQ7Z7A4 578 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 OAFQ86UD1 273 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 UEVLDQ8IX04 471 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 TUSC5Q8IXB3 177 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 GCNT2Q8N0V5 402 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 UBE2J2Q8N2K1 259 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 TMEM99Q8N816 258 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 OR9K2Q8NGE7 335 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 OR2T29Q8NH02 315 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 OR5J2Q8NH18 312 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ABHD3Q8WU67 409 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 RNASE6Q93091 150 aaKnown RBP7.37□□□□□ -1.23
SF3A1-208ENST00000485618 APH1AQ96BI3 265 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF524Q96C55 264 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 RSPO3Q9BXY4 272 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-208ENST00000485618 B3GAT2Q9NPZ5 323 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 UPB1Q9UBR1 384 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 SLC7A8Q9UHI5 535 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 IGKV1D-42A0A075B6H8 117 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 IGHV3-15A0A0B4J1V0 119 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 A0A1W2PRG6 482 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 A8MXE2 369 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 EFCAB9A8MZ26 197 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 FTCDNL1E5RQL4 147 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 BLOC1S5-TXNDC5H3BN57 136 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 M0R082 166 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 RNF13O43567 381 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 DEAF1O75398 565 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 E2F6O75461 281 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 TNFSF13O75888 250 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 OR7A10O76100 309 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 CCNB2O95067 398 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 CST1P01037 141 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ADORA3P0DMS8 318 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 NR2C1P13056 603 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PPP3CBP16298 524 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PAX7P23759 505 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 AGTR1P30556 359 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 UQCRC1P31930 480 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 KIR2DL2P43627 348 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 DAP3P51398 398 aaKnown RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 HMGA2P52926 109 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PRPS1P60891 318 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 SIRPAP78324 504 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 VLDLRP98155 873 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PRKCDQ05655 676 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ZP4Q12836 540 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ZSCAN26Q16670 478 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 FBXL19-AS1Q494R0 122 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 SP5Q6BEB4 398 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ABLIM2Q6H8Q1 611 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ZFP1Q6P2D0 407 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PODNL1Q6PEZ8 512 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 AAED1Q7RTV5 226 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 NKAIN4Q8IVV8 208 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 CCDC103Q8IW40 242 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 NRMQ8IXM6 262 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 RPRMLQ8N4K4 120 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 POMGNT2Q8NAT1 580 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 STEAP2Q8NFT2 490 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 OR52J3Q8NH60 311 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF417Q8TAU3 575 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 SLC7A13Q8TCU3 470 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 TMEM255BQ8WV15 326 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 LIPHQ8WWY8 451 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 TMEM45BQ96B21 275 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 STARD4Q96DR4 205 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ADAD1Q96M93 576 aaKnown RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ALPK1Q96QP1 1244 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF587Q96SQ5 575 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PSD2Q9BQI7 771 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PRSS27Q9BQR3 290 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 WFDC6Q9BQY6 131 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 PTDSS2Q9BVG9 487 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 RBM24Q9BX46 236 aaKnown RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF556Q9HAH1 456 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 CCM2LQ9NUG4 571 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 RHCGQ9UBD6 479 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 DNAJB9Q9UBS3 223 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 CLEC4AQ9UMR7 237 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 RCE1Q9Y256 329 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 SAMHD1Q9Y3Z3 626 aaKnown RBP7.36□□□□□ -1.23
SF3A1-208ENST00000485618 TESMINQ9Y4I5 508 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 ARHGAP21Q5T5U3 1957 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 DOCK7Q96N67 2140 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 CENPEQ02224 2701 aa7.36□□□□□ -1.23
SF3A1-208ENST00000485618 INTS1Q8N201 2190 aaKnown RBP7.35□□□□□ -1.23
SF3A1-208ENST00000485618 A0A087WUU8 490 aa7.35□□□□□ -1.23
SF3A1-208ENST00000485618 TCRBV5S2A0A599 114 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms