RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SLC6A6P31641 620 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 CLK1P49759 484 aaKnown RBP13.03□□□□□ -0.32
LRIF1-202ENST00000485275 ERVK-25P63136 954 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 C3AR1Q16581 482 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 ASB18Q6ZVZ8 466 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 SIAH3Q8IW03 269 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 TCEANCQ8N8B7 351 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 ZPLD1Q8TCW7 415 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 SGCDQ92629 289 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 RASD2Q96D21 266 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 B3GNT3Q9Y2A9 372 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 PCDHGB7Q9Y5F8 929 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 IGHV3-15A0A0B4J1V0 119 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 EIF1AYO14602 144 aaKnown RBP13.02□□□□□ -0.32
LRIF1-202ENST00000485275 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PMS2P2O95744 297 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.32
LRIF1-202ENST00000485275 ADORA3P0DMS8 318 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 ZNF708P17019 499 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 FMO3P31513 532 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PCYT1AP49585 367 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 OR2B6P58173 313 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PRPS1P60891 318 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 CDC42P60953 191 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 H3F3AP84243 136 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 FOXK2Q01167 660 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PMS2P3Q13401 168 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 SCAIQ8N9R8 606 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 Q8NA96 180 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 SETD9Q8NE22 299 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 TSPAN32Q96QS1 320 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 UCN2Q96RP3 112 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 HCAR1Q9BXC0 346 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.32
LRIF1-202ENST00000485275 CHST11Q9NPF2 352 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PNPLA3Q9NST1 481 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 IER3IP1Q9Y5U9 82 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 HSPE1-MOB4S4R3N1 261 aa13.02□□□□□ -0.32
LRIF1-202ENST00000485275 PKD1L2Q7Z442 2459 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 SULT2B1O00204 365 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 SERPINI2O75830 405 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 SMNDC1O75940 238 aaKnown RBP eCLIP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 HIST1H1CP16403 213 aaKnown RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 GRK5P34947 590 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 RPL4P36578 427 aaKnown RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 CHN2P52757 468 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 CTXN1P60606 82 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 PUDPQ08623 228 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 SLC10A1Q14973 349 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 SNAPC1Q16533 368 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 CASP12Q6UXS9 341 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 NHLRC1Q6VVB1 395 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 DPY19L2P2Q6ZN68 376 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF786Q8N393 782 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 FAM98AQ8NCA5 519 aaKnown RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 OR10D3Q8NH80 312 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF845Q96IR2 970 aaPredicted RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 Q96M85 177 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 ERMAPQ96PL5 475 aaPredicted RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 TAPBPLQ9BX59 468 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 ASPNQ9BXN1 380 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 PRORYQ9H606 182 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 HINT3Q9NQE9 182 aaKnown RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.33
LRIF1-202ENST00000485275 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 DNAJC27Q9NZQ0 273 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
LRIF1-202ENST00000485275 TEX13CA0A0J9YWL9 993 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 FAM183AA6NL82 134 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 SMAD9O15198 467 aaKnown RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 TLX2O43763 284 aaPredicted RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 XPNPEP2O43895 674 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 IGHG3P01860 377 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 HIST1H2ABP04908 130 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 CD14P08571 375 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 ENPP1P22413 925 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 AHCYP23526 432 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 FKBP2P26885 142 aaKnown RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 NOS3P29474 1203 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 RPS6KA3P51812 740 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 NUDT6P53370 316 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 HSF1Q00613 529 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF239Q16600 458 aaKnown RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 ANKDD1AQ495B1 522 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 MESTQ5EB52 335 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 C6orf141Q5SZD1 244 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 VASNQ6EMK4 673 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 ESPNLQ6ZVH7 1005 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 PTCHD4Q6ZW05 846 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 H1FNTQ75WM6 255 aaPredicted RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 HIST3H2AQ7L7L0 130 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 DEPDC4Q8N2C3 294 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 LSM14AQ8ND56 463 aaKnown RBP13.01□□□□□ -0.33
LRIF1-202ENST00000485275 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 HIST1H2ACQ93077 130 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms