RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 DNAJA4Q8WW22 397 aaPredicted RBP17.59■□□□□ 0.41
ACTB-212ENST00000484841 SPDL1Q96EA4 605 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 C7orf26Q96N11 449 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 KATNB1Q9BVA0 655 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 C12orf10Q9HB07 376 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 CCDC167Q9P0B6 97 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 CORO2BQ9UQ03 480 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 CHST2Q9Y4C5 530 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 CSPG4Q6UVK1 2322 aa17.59■□□□□ 0.41
ACTB-212ENST00000484841 IGHV1-18A0A0C4DH31 117 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 EVPLLA8MZ36 301 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 HOXB1P14653 301 aaPredicted RBP17.58■□□□□ 0.4
ACTB-212ENST00000484841 SERPINF1P36955 418 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 PDLIM4P50479 330 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 CDK6Q00534 326 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 LGALS3BPQ08380 585 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 ALG10BQ5I7T1 473 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 REEP3Q6NUK4 255 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 VHLLQ6RSH7 139 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 SLC46A3Q7Z3Q1 461 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 MAGEE2Q8TD90 523 aaPredicted RBP17.58■□□□□ 0.4
ACTB-212ENST00000484841 DYDC1Q8WWB3 177 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 BCL2L2Q92843 193 aaPredicted RBP17.58■□□□□ 0.4
ACTB-212ENST00000484841 KTI12Q96EK9 354 aaPredicted RBP17.58■□□□□ 0.4
ACTB-212ENST00000484841 KCNK17Q96T54 332 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 VRK1Q99986 396 aaPredicted RBP17.58■□□□□ 0.4
ACTB-212ENST00000484841 RCE1Q9Y256 329 aa17.58■□□□□ 0.4
ACTB-212ENST00000484841 ARPC4-TTLL3A0A0A6YYG9 625 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 PRORSD1PA6NEY8 169 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 FTCDNL1E5RQL4 147 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 SERPINB7O75635 380 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 ARAFP10398 606 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 NQO1P15559 274 aaKnown RBP17.57■□□□□ 0.4
ACTB-212ENST00000484841 SLC6A2P23975 617 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 CARTPTQ16568 116 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 BEND6Q5SZJ8 279 aaPredicted RBP17.57■□□□□ 0.4
ACTB-212ENST00000484841 LRIF1Q5T3J3 769 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 C6orf52Q5T4I8 152 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 FAM69AQ5T7M9 428 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 AGBL2Q5U5Z8 902 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 CYB5R2Q6BCY4 276 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 ULK3Q6PHR2 472 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 C6orf89Q6UWU4 347 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 PIK3C3Q8NEB9 887 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 BHLHE22Q8NFJ8 381 aaPredicted RBP17.57■□□□□ 0.4
ACTB-212ENST00000484841 SPATA3Q8NHX4 192 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 C10orf105Q8TEF2 133 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 ZNF607Q96SK3 696 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 EPYCQ99645 322 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 CCDC28BQ9BUN5 200 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 PTDSS2Q9BVG9 487 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 TMEM27Q9HBJ8 222 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 CA10Q9NS85 328 aa17.57■□□□□ 0.4
ACTB-212ENST00000484841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.57■□□□□ 0.4
ACTB-212ENST00000484841 TRAV36DV7A0A075B6V5 113 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 A0A1B0GWA3 101 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 ERCC1P07992 297 aaPredicted RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 USF1P22415 310 aaPredicted RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 CBLP22681 906 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 MRPL19P49406 292 aaKnown RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 IDH3AP50213 366 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 TUBA1BP68363 451 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 TUBA4AP68366 448 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 LSM11P83369 360 aaKnown RBP eCLIP17.56■□□□□ 0.49e-19■■■■■ 27
ACTB-212ENST00000484841 VLDLRP98155 873 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 EGR4Q05215 589 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 MFSD13AQ14CX5 517 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 C3orf36Q3SXR2 165 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 BLOC1S3Q6QNY0 202 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 TUBA1AQ71U36 451 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 H1FNTQ75WM6 255 aaPredicted RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 UEVLDQ8IX04 471 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 LSMEM1Q8N8F7 131 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 ANKK1Q8NFD2 765 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 OR4F15Q8NGB8 312 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 SLC47A1Q96FL8 570 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 PIMREGQ9BSJ6 248 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 ASPNQ9BXN1 380 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 MYOZ1Q9NP98 299 aaPredicted RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 TESQ9UGI8 421 aaKnown RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 FBXO9Q9UK97 447 aaPredicted RBP17.56■□□□□ 0.4
ACTB-212ENST00000484841 CDC42EP3Q9UKI2 254 aa17.56■□□□□ 0.4
ACTB-212ENST00000484841 TLN2Q9Y4G6 2542 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 B9A039 149 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 M0R082 166 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 NDUFS8O00217 210 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 GRPRP30550 384 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 CAPZA2P47755 286 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 RGS8P57771 180 aaPredicted RBP17.55■□□□□ 0.4
ACTB-212ENST00000484841 ARF1P84077 181 aaKnown RBP17.55■□□□□ 0.4
ACTB-212ENST00000484841 NAAAQ02083 359 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 SCARB2Q14108 478 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 SWI5Q1ZZU3 235 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 AGKQ53H12 422 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 FAM91A1Q658Y4 838 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 DHRS4L2Q6PKH6 230 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 C10orf53Q8N6V4 93 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 ZNF417Q8TAU3 575 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 TAAR8Q969N4 342 aa17.55■□□□□ 0.4
ACTB-212ENST00000484841 ZNF587Q96SQ5 575 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms