RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 Q6ZNB5 142 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 DNM1P46Q6ZS02 220 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 OR4A4PQ8NGN8 299 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 PHYHIPLQ96FC7 376 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ARL5BQ96KC2 179 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SEBOXQ9HB31 216 aaPredicted RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 TREM1Q9NP99 234 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 MTFP1Q9UDX5 166 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 CENPVL1A0A0U1RR11 272 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 A0A1W2PPE3 182 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 TRAPPC13A5PLN9 417 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 PSMD9O00233 223 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 UBE2CO00762 179 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 CCSO14618 274 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 RAD1O60671 282 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 PQBP1O60828 265 aaKnown RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 OR2F2O95006 317 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 HTR3BO95264 441 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 EOMESO95936 686 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 GTF2F2P13984 249 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 S100PP25815 95 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 PSMB5P28074 263 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 NTSP30990 170 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 PRKAR1BP31321 381 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 OR1D2P34982 312 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 DLSTP36957 453 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ARFIP1P53367 373 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 OR2F1Q13607 317 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SMCO1Q147U7 214 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 TAF13Q15543 124 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ACER2Q5QJU3 275 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 RPL22L1Q6P5R6 122 aaKnown RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 LCTLQ6UWM7 567 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF813Q6ZN06 617 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF793Q6ZN11 406 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SLC24A5Q71RS6 500 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 LRRTM1Q86UE6 522 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 JAZF1Q86VZ6 243 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 MISPQ8IVT2 679 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SKA3Q8IX90 412 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 OR8S1Q8NH09 359 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 OR51A7Q8NH64 312 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 C2orf15Q8WU43 125 aaKnown RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 RGP1Q92546 391 aaPredicted RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF285Q96NJ3 590 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 CNTNAP3BQ96NU0 1288 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SPSB2Q99619 263 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 PAPOLGQ9BWT3 736 aaKnown RBP10.83□□□□□ -0.68
VTI1A-205ENST00000483122 ASF1AQ9Y294 204 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 SLC35A3Q9Y2D2 325 aa10.83□□□□□ -0.68
VTI1A-205ENST00000483122 KCNAB3O43448 404 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 POP4O95707 220 aaKnown RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 CD8AP01732 235 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 HEXAP06865 529 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 SPI1P17947 270 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF136P52737 540 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF345Q14585 488 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 POM121L1PQ3SYA9 428 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 PRAMEF8Q5VWM4 474 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 PRAMEF7Q5VXH5 474 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 TXNDC8Q6A555 127 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 C11orf87Q6NUJ2 197 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 C3orf33Q6P1S2 294 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 GDPD4Q6W3E5 623 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF836Q6ZNA1 936 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 DND1Q8IYX4 353 aaKnown RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 SNX33Q8WV41 574 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 CNRIP1Q96F85 164 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 CPNE2Q96FN4 548 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 SEC22AQ96IW7 307 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 AICDAQ9GZX7 198 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 MRPS30Q9NP92 439 aaKnown RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 KRCC1Q9NPI7 259 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 FBXO4Q9UKT5 387 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF443Q9Y2A4 671 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 F5H0A9 414 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 H7BY64 318 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 H7C4K7 107 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 FGF16O43320 207 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 TXNL1O43396 289 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 PAPLNO95428 1278 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ANXA2P07355 339 aaKnown RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 OR4E1P0C645 316 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 GKN3PP0CG01 181 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 F3P13726 295 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ADRA2CP18825 462 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 MNDAP41218 407 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 MC3RP41968 323 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 RBM39Q14498 530 aaKnown RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 PEA15Q15121 130 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 EIF2S3LQ2VIR3 472 aaKnown RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 C17orf64Q86WR6 236 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ZSCAN1Q8NBB4 408 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 NUP43Q8NFH3 380 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 TMEM239Q8WW34 195 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF764Q96H86 408 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 PRAP1Q96NZ9 151 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms