RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 GIMAP5Q96F15 307 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 DERL3Q96Q80 235 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 CMKLR1Q99788 373 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 NUDT22Q9BRQ3 303 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 MEPEQ9NQ76 525 aaPredicted RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 NCDNQ9UBB6 729 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 TRAV18A0A075B6X5 111 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 IMPA2O14732 288 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 UCHL1P09936 223 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 ERP29P30040 261 aaKnown RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 ZNF136P52737 540 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 EEF1A1P68104 462 aaKnown RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 DGCR2P98153 550 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 MELKQ14680 651 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 GARNL3Q5VVW2 1013 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 LRRN1Q6UXK5 716 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 SIAH3Q8IW03 269 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 NAXEQ8NCW5 288 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 OR5H6Q8NGV6 325 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 OR2T35Q8NGX2 323 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 SYNPRQ8TBG9 265 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 BRIX1Q8TDN6 353 aaKnown RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 SNAPC3Q92966 411 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 DPCDQ9BVM2 203 aaPredicted RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 HOXD1Q9GZZ0 328 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 ATG5Q9H1Y0 275 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 ZNF304Q9HCX3 659 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 LSM2Q9Y333 95 aaKnown RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 SIRT4Q9Y6E7 314 aaPredicted RBP8.39□□□□□ -1.07
CALD1-220ENST00000482470 V9GYH0 126 aa8.39□□□□□ -1.07
CALD1-220ENST00000482470 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 A0A087WV62 115 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 A0A1W2PPC4 97 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 TRIM64BA6NI03 449 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 RFPL3O75679 317 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ANXA3P12429 323 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 GTF2F2P13984 249 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 PRKXP51817 358 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 TSPAN5P62079 268 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 PSG6Q00889 435 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 OC90Q02509 493 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ZNF227Q86WZ6 799 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 SLITRK4Q8IW52 837 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 POGLUT1Q8NBL1 392 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 MAP6Q96JE9 813 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 SIGLEC11Q96RL6 698 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ORAI3Q9BRQ5 295 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 GPN1Q9HCN4 374 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 FLRT3Q9NZU0 649 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 V9GY05 133 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 FXYD6-FXYD2A0A087WZ82 144 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 IGHV5-51A0A0C4DH38 117 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 A0A1B0GTH9 108 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 PRICKLE3O43900 615 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 TRIM3O75382 744 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 RBBP9O75884 186 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 KRT33AO76009 404 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 GPANK1O95872 356 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 PNMTP11086 282 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ART1P52961 327 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ASAH1Q13510 395 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 LIPNQ5VXI9 398 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 MAMDC2Q7Z304 686 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 ZNF440Q8IYI8 595 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 PM20D2Q8IYS1 436 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 APOBEC4Q8WW27 367 aaKnown RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 TMEM106AQ96A25 262 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 FXYD6Q9H0Q3 95 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 B3GAT2Q9NPZ5 323 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 FGF21Q9NSA1 209 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 KCNE5Q9UJ90 142 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 POMT2Q9UKY4 750 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 CYR61O00622 381 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ARPC1BO15143 372 aaKnown RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 FABP7O15540 132 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 SYPP08247 313 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 CD14P08571 375 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 SPI1P17947 270 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 IFITM2Q01629 132 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 FAAP20Q6NZ36 180 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 RPL22L1Q6P5R6 122 aaKnown RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 C16orf47Q6ZP98 133 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 KANSL1Q7Z3B3 1105 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 NARS2Q96I59 477 aaKnown RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 GTPBP2Q9BX10 602 aaKnown RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 RSPO3Q9BXY4 272 aaPredicted RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 OR11A1Q9GZK7 315 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 ZMAT3Q9HA38 289 aaKnown RBP8.38□□□□□ -1.07
CALD1-220ENST00000482470 ELOVL3Q9HB03 270 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 INPP5EQ9NRR6 644 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 GMEB2Q9UKD1 530 aa8.38□□□□□ -1.07
CALD1-220ENST00000482470 LOC105371267A0A1B0GV96 52 aa8.37□□□□□ -1.07
CALD1-220ENST00000482470 ZGLP1P0C6A0 271 aa8.37□□□□□ -1.07
CALD1-220ENST00000482470 MAPK3P27361 379 aaPredicted RBP8.37□□□□□ -1.07
CALD1-220ENST00000482470 SFTPDP35247 375 aa8.37□□□□□ -1.07
CALD1-220ENST00000482470 PSMA6P60900 246 aaKnown RBP8.37□□□□□ -1.07
CALD1-220ENST00000482470 GALK2Q01415 458 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms