RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SPIBQ01892 262 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 LTBQ06643 244 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 PPP1R8Q12972 351 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 CCNIQ14094 377 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 HSPB2Q16082 182 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 IQCCQ4KMZ1 466 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 FAM98BQ52LJ0 330 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 OTUD3Q5T2D3 398 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 ZNF730Q6ZMV8 503 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 Q71RC1 249 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 AQP12AQ8IXF9 295 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 OFCC1Q8IZS5 231 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 KDM8Q8N371 416 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 TMEM99Q8N816 258 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 CNEP1R1Q8N9A8 125 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MBD3L2Q8NHZ7 208 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 FAM222BQ8WU58 562 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 TMEM239Q8WW34 195 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 RNASE6Q93091 150 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 ZHX1-C8orf76Q96EF9 292 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MPP4Q96JB8 637 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MOGAT1Q96PD6 335 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 EPYCQ99645 322 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 PIP5K1AQ99755 562 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 TM9SF2Q99805 663 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 TMEM43Q9BTV4 400 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MAGIXQ9H6Y5 334 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 IL1RAPQ9NPH3 570 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MEPEQ9NQ76 525 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 JKAMPQ9P055 326 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 C6orf203Q9P0P8 240 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 TRAPPC4Q9Y296 219 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 ZNF175Q9Y473 711 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 ARID1AO14497 2285 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 TRBV4-1A0A0J9YWV2 114 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 TCRBV3S1A0A5B6 114 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 M0R082 166 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 RCBTB2O95199 551 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 GADD45GO95257 159 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 BGLAPP02818 100 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 RAP2AP10114 183 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 THRBP10828 461 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 UMPSP11172 480 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 FCGR2AP12318 317 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 IFI30P13284 250 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 NQO1P15559 274 aaKnown RBP8.05□□□□□ -1.12
VCP-206ENST00000480327 FUT1P19526 365 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 RRM2P31350 389 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 TIMP3P35625 211 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 IL1RL1Q01638 556 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 RASGEF1BQ0VAM2 473 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 KPNB1Q14974 876 aaKnown RBP8.05□□□□□ -1.12
VCP-206ENST00000480327 FAM69AQ5T7M9 428 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 PODNL1Q6PEZ8 512 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 PIWIL3Q7Z3Z3 882 aaKnown RBP8.05□□□□□ -1.12
VCP-206ENST00000480327 YTHDF3Q7Z739 585 aaKnown RBP8.05□□□□□ -1.12
VCP-206ENST00000480327 GPAT4Q86UL3 456 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 TUSC5Q8IXB3 177 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 NRMQ8IXM6 262 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 LRRC17Q8N6Y2 441 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 PIK3C3Q8NEB9 887 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 MFSD8Q8NHS3 518 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 ZNF417Q8TAU3 575 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 LINC01560Q8TB33 94 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 RNF128Q8TEB7 428 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 SLCO4A1Q96BD0 722 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 HS6ST2Q96MM7 605 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 ZNF347Q96SE7 839 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 ZNF587Q96SQ5 575 aaPredicted RBP8.05□□□□□ -1.12
VCP-206ENST00000480327 NAA11Q9BSU3 229 aaPredicted RBP8.05□□□□□ -1.12
VCP-206ENST00000480327 CHID1Q9BWS9 393 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 RNF122Q9H9V4 155 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 C20orf141Q9NUB4 165 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 VNN3Q9NY84 501 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 MED31Q9Y3C7 131 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 JMJD1CQ15652 2540 aa8.05□□□□□ -1.12
VCP-206ENST00000480327 DSCAMO60469 2012 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 A0A087WUU8 490 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 A0A1W2PNV4 684 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 AQP7P3A6NL99 342 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 FTCDNL1E5RQL4 147 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 TNFRSF11BO00300 401 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 GNGT2O14610 69 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 DVL2O14641 736 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 OR2T1O43869 369 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 EIF1BO60739 113 aaKnown RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 CYTIPO60759 359 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 FKBP6O75344 327 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 TIPRLO75663 272 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 SERPINI2O75830 405 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
VCP-206ENST00000480327 CST1P01037 141 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 RAF1P04049 648 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 EPXP11678 715 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 CD53P19397 219 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 MAKP20794 623 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 CTSSP25774 331 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 RBM34P42696 430 aaKnown RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 MAGEA2P43356 314 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms