RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TMEM45BQ96B21 275 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 BPIFA2Q96DR5 249 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 SGTBQ96EQ0 304 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 OXGR1Q96P68 337 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 C20orf141Q9NUB4 165 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 B3GAT1Q9P2W7 334 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 NOSIPQ9Y314 301 aaKnown RBP17.53■□□□□ 0.4
LIME1-205ENST00000480139 A1L4Q6 167 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 PLPP3O14495 311 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 KRT36O76013 467 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 OR7A10O76100 309 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 GADD45GO95257 159 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 NQO1P15559 274 aaKnown RBP17.52■□□□□ 0.4
LIME1-205ENST00000480139 OR3A2P47893 321 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 SPIBQ01892 262 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 PMS2P3Q13401 168 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 FGD3Q5JSP0 725 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 PODNL1Q6PEZ8 512 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 GPAT4Q86UL3 456 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 STK32CQ86UX6 486 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 SPATA24Q86W54 205 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 NRMQ8IXM6 262 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 ACBD4Q8NC06 268 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 CANT1Q8WVQ1 401 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 OPN3Q9H1Y3 402 aaPredicted RBP17.52■□□□□ 0.4
LIME1-205ENST00000480139 PARPBPQ9NWS1 579 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 TESMINQ9Y4I5 508 aa17.52■□□□□ 0.4
LIME1-205ENST00000480139 ICE1Q9Y2F5 2266 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 TRBV4-1A0A0J9YWV2 114 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 PRSS44E7EML9 344 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 MS4A18H0YCH9 400 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 PIP5K1CO60331 668 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 TSPAN19P0C672 248 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 IFI30P13284 250 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 CBLP22681 906 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 RRM2P31350 389 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 HMGA2P52926 109 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 PUDPQ08623 228 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 ZP4Q12836 540 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 MS4A18Q3C1V0 323 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 TFAP2EQ6VUC0 442 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 CREB3L2Q70SY1 520 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 RRM2BQ7LG56 351 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 LUZP2Q86TE4 346 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 ZIC4Q8N9L1 334 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 ZNF610Q8N9Z0 462 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 UTP4Q969X6 686 aaKnown RBP17.51■□□□□ 0.39
LIME1-205ENST00000480139 RBM24Q9BX46 236 aaKnown RBP17.51■□□□□ 0.39
LIME1-205ENST00000480139 C12orf49Q9H741 205 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 NPDC1Q9NQX5 325 aaPredicted RBP17.51■□□□□ 0.39
LIME1-205ENST00000480139 ELOVL5Q9NYP7 299 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 PLEKHB1Q9UF11 243 aaPredicted RBP17.51■□□□□ 0.39
LIME1-205ENST00000480139 TMEM5Q9Y2B1 443 aa17.51■□□□□ 0.39
LIME1-205ENST00000480139 UTP20O75691 2785 aaKnown RBP17.51■□□□□ 0.39
LIME1-205ENST00000480139 MRPL33O75394 65 aaKnown RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 CIB2O75838 187 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 CNOT4O95628 575 aaKnown RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 HIST1H2ABP04908 130 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 ZNF43P17038 809 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 IGFBP2P18065 325 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 FUT1P19526 365 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 PEX19P40855 299 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 LIMS1P48059 325 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 LSM11P83369 360 aaKnown RBP eCLIP17.5■□□□□ 0.39
LIME1-205ENST00000480139 SORDQ00796 357 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 FOXD4Q12950 439 aaPredicted RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 GK3PQ14409 553 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 ANKDD1AQ495B1 522 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 C1orf146Q5VVC0 180 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 ZNF474Q6S9Z5 364 aaPredicted RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 BEND4Q6ZU67 534 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 TMPRSS11FQ6ZWK6 438 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 HIST3H2AQ7L7L0 130 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 NANOGNBQ7Z5D8 188 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 PXKQ7Z7A4 578 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 EPHX4Q8IUS5 362 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 CDK20Q8IZL9 346 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 LRRC17Q8N6Y2 441 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 PAPD5Q8NDF8 572 aaKnown RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 HIST1H2ACQ93077 130 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 APH1AQ96BI3 265 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 ZNF775Q96BV0 537 aaPredicted RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 CHID1Q9BWS9 393 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 YY1AP1Q9H869 796 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 KRCC1Q9NPI7 259 aaPredicted RBP17.5■□□□□ 0.39
LIME1-205ENST00000480139 GALNT8Q9NY28 637 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 AURKCQ9UQB9 309 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 RCE1Q9Y256 329 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 NOX1Q9Y5S8 564 aa17.5■□□□□ 0.39
LIME1-205ENST00000480139 SH3PXD2BA1X283 911 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 OR6A2O95222 327 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 HPRP00739 348 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 GRNP28799 593 aaKnown RBP17.49■□□□□ 0.39
LIME1-205ENST00000480139 NTF4P34130 210 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 SLC9A3P48764 834 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 SEC23BQ15437 767 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 OR2T5Q6IEZ7 315 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 TBPL2Q6SJ96 375 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 UEVLDQ8IX04 471 aa17.49■□□□□ 0.39
LIME1-205ENST00000480139 ZNF100Q8IYN0 542 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms