RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 ARMC7Q9H6L4 198 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 CD300AQ9UGN4 299 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 A8MVM7 634 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 INAFM1C9JVW0 142 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 RNF223E7ERA6 249 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 M0R1B8 84 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 PDLIM1O00151 329 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 NME4O00746 187 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 AKR7A3O95154 331 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 STAMBPO95630 424 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 CD8AP01732 235 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 IGHV4-39P01824 125 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 PRG2P13727 222 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 CD40P25942 277 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 TGFBR3Q03167 851 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 CCNIQ14094 377 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 FLOT2Q14254 428 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 TRIM25Q14258 630 aaKnown RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 TSPO2Q5TGU0 170 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 SLC22A25Q6T423 547 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 DLEU7Q6UYE1 221 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 SLC15A3Q8IY34 581 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 CLIP4Q8N3C7 705 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 C17orf78Q8N4C9 275 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 TMEM99Q8N816 258 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 C1orf162Q8NEQ5 155 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 OR9K2Q8NGE7 335 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 GTF2H4Q92759 462 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 TMEM45BQ96B21 275 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 MUS81Q96NY9 551 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 CGREF1Q99674 301 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 SF3B5Q9BWJ5 86 aaKnown RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 AMBRA1Q9C0C7 1298 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 BARX1Q9HBU1 254 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 CMTM6Q9NX76 183 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 AP3M1Q9Y2T2 418 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 IFT52Q9Y366 437 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
ATG4B-218ENST00000479554 ANK3Q12955 4377 aaKnown RBP12.59□□□□□ -0.39
ATG4B-218ENST00000479554 HIVEP2P31629 2446 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 A0A096LPI6 279 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 PRORSD1PA6NEY8 169 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 CLIC1O00299 241 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 FRS3O43559 492 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 KRT36O76013 467 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 HSD17B1P14061 328 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 MPGP29372 298 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 ACVR1BP36896 505 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 BNIP2Q12982 314 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 FADDQ13158 208 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 RGNQ15493 299 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 AAED1Q7RTV5 226 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 GPAT4Q86UL3 456 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 DEPDC4Q8N2C3 294 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 RNF148Q8N7C7 305 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 MAPK1IP1LQ8NDC0 245 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 OR8J3Q8NGG0 315 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 ASB9Q96DX5 294 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 ZNF385AQ96PM9 386 aaKnown RBP12.58□□□□□ -0.4
ATG4B-218ENST00000479554 SH3GL1Q99961 368 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 DHRS9Q9BPW9 319 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 MUC13Q9H3R2 512 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 NANOGQ9H9S0 305 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 A4GALTQ9NPC4 353 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 ADPRHL2Q9NX46 363 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 CADP27708 2225 aa12.58□□□□□ -0.4
ATG4B-218ENST00000479554 C5orf58C9J3I9 102 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 E7EQL1 145 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 NDUFS7O75251 213 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 NUDT7P0C024 238 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 PTNP21246 168 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 RCN1Q15293 331 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 NRF1Q16656 503 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 LRIF1Q5T3J3 769 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 PRAMEF8Q5VWM4 474 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 PRAMEF7Q5VXH5 474 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 TMEM225Q6GV28 225 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 KLHL24Q6TFL4 600 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 ABHD12BQ7Z5M8 362 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-218ENST00000479554 FBXL14Q8N1E6 418 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 ZIC4Q8N9L1 334 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 WDR31Q8NA23 367 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 POMGNT2Q8NAT1 580 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms