RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 HGFACQ04756 655 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 MAPK11Q15759 364 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 LIN52Q52LA3 116 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 C1orf140Q5VVS0 124 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 SPATA19Q7Z5L4 167 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 GPAT4Q86UL3 456 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 MEX3DQ86XN8 651 aaKnown RBP11.53□□□□□ -0.56
ABCF1-206ENST00000479542 DNAJA3Q96EY1 480 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 CHODLQ9H9P2 273 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 THAP1Q9NVV9 213 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 TMEFF2Q9UIK5 374 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-206ENST00000479542 ZNF232Q9UNY5 417 aa11.53□□□□□ -0.56
ABCF1-206ENST00000479542 HAX1O00165 279 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 OR2T1O43869 369 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 LGI1O95970 557 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 DAOP14920 347 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 CDH2P19022 906 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-206ENST00000479542 NPR2P20594 1047 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 CALCRP30988 508 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 SELENOPP49908 381 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 MVDP53602 400 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 CRISP3P54108 245 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-206ENST00000479542 CDH15P55291 814 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 LARS2Q15031 903 aaKnown RBP11.52□□□□□ -0.57
ABCF1-206ENST00000479542 AGBL2Q5U5Z8 902 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 PRAMEF8Q5VWM4 474 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 PRAMEF7Q5VXH5 474 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 ATG16L1Q676U5 607 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 C6orf89Q6UWU4 347 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF621Q6ZSS3 439 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF627Q7L945 461 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 LINGO2Q7L985 606 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 NET1Q7Z628 596 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-206ENST00000479542 ANKS4BQ8N8V4 417 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 OR52P1PQ8NH57 321 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 OR52E6Q96RD3 313 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 DENND2DQ9H6A0 471 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-206ENST00000479542 P2RX2Q9UBL9 471 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 IFT52Q9Y366 437 aa11.52□□□□□ -0.57
ABCF1-206ENST00000479542 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 A0A0G2JPF8 293 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 HNRNPCL2B2RXH8 293 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 HNRNPCL3B7ZW38 293 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 HDAC3O15379 428 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 HNRNPCL1O60812 293 aaKnown RBP11.51□□□□□ -0.57
ABCF1-206ENST00000479542 UPK3AO75631 287 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 IL6P05231 212 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 ALDOCP09972 364 aaKnown RBP11.51□□□□□ -0.57
ABCF1-206ENST00000479542 HNRNPCL4P0DMR1 293 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 KITP10721 976 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF43P17038 809 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 ROR2Q01974 943 aaKnown RBP11.51□□□□□ -0.57
ABCF1-206ENST00000479542 NIPAL3Q6P499 406 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 MSANTD1Q6ZTZ1 278 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 OR6S1Q8NH40 331 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 UBASH3BQ8TF42 649 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 C3orf49Q96BT1 292 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 LRR1Q96L50 414 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 TEX37Q96LM6 180 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 OXGR1Q96P68 337 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 SPATA9Q9BWV2 254 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 MS4A5Q9H3V2 200 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 WDR55Q9H6Y2 383 aaPredicted RBP11.51□□□□□ -0.57
ABCF1-206ENST00000479542 AIG1Q9NVV5 245 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 RLIMQ9NVW2 624 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 GPR45Q9Y5Y3 372 aa11.51□□□□□ -0.57
ABCF1-206ENST00000479542 TRPC5OSA6NMA1 111 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 B4DSR2 109 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 hCG_2039718K7EN88 272 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 RFXANKO14593 260 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 AHSA1O95433 338 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 C1QCP02747 245 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 IGFBP1P08833 259 aaPredicted RBP11.5□□□□□ -0.57
ABCF1-206ENST00000479542 GKN3PP0CG01 181 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 EPHA3P29320 983 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 IL12AP29459 219 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 THBS4P35443 961 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 NME5P56597 212 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 UFM1P61960 85 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 MRPS11P82912 194 aaKnown RBP11.5□□□□□ -0.57
ABCF1-206ENST00000479542 EGR4Q05215 589 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 SCGB2A2Q13296 93 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 MFSD13AQ14CX5 517 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 SLC9B1Q4ZJI4 515 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 COX20Q5RI15 118 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 REP15Q6BDI9 236 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF836Q6ZNA1 936 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 HMGN2P46Q86SG4 172 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 LSMEM1Q8N8F7 131 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 ADPRHL1Q8NDY3 354 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 SLC38A5Q8WUX1 472 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 ALKBH3Q96Q83 286 aaPredicted RBP11.5□□□□□ -0.57
ABCF1-206ENST00000479542 PTDSS2Q9BVG9 487 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 BCL2L10Q9HD36 194 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 B3GNT2Q9NY97 397 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 B3GAT1Q9P2W7 334 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 USP22Q9UPT9 525 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms