RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 COX15Q7KZN9 410 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 ZNF546Q86UE3 836 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 PAQR7Q86WK9 346 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 PIANPQ8IYJ0 282 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 ACOT4Q8N9L9 421 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 TMEM158Q8WZ71 300 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 NDRG1Q92597 394 aaKnown RBP3.41□□□□□ -1.86
CCDC58-204ENST00000479414 RNF185Q96GF1 192 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 CLCC1Q96S66 551 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 CHRDL1Q9BU40 450 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 TRIM62Q9BVG3 475 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 EML4Q9HC35 981 aaKnown RBP3.41□□□□□ -1.86
CCDC58-204ENST00000479414 MCCC2Q9HCC0 563 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 CACNG2Q9Y698 323 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 A0A1B0GVL5 298 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 CXCL11O14625 94 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 TIMM8AO60220 97 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-204ENST00000479414 SCGNO76038 276 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 GIPP09681 153 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-204ENST00000479414 CCNCP24863 283 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 FMO3P31513 532 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 PRPHP41219 470 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 LHX2P50458 406 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 SEC61GP60059 68 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 IRX3P78415 501 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-204ENST00000479414 ASPHQ12797 758 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 OR5I1Q13606 314 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 PSG5Q15238 335 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 ATP6AP1Q15904 470 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 KLHL38Q2WGJ6 581 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 FILIP1LQ4L180 1135 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 MARCH8Q5T0T0 291 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 CYB5R2Q6BCY4 276 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 LRRC75A-AS1Q8N1F1 130 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 OR1L4Q8NGR5 311 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 BLOC1S5Q8TDH9 187 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 ACER1Q8TDN7 264 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC58-204ENST00000479414 OR2M2Q96R28 347 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 COPS8Q99627 209 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 TMEM246Q9BRR3 403 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 OR11A1Q9GZK7 315 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 AZI2Q9H6S1 392 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 PLGRKTQ9HBL7 147 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 C6orf203Q9P0P8 240 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-204ENST00000479414 MMP17Q9ULZ9 603 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 TRAPPC4Q9Y296 219 aa3.4□□□□□ -1.87
CCDC58-204ENST00000479414 DDX49Q9Y6V7 483 aaKnown RBP3.4□□□□□ -1.87
CCDC58-204ENST00000479414 A6NDX4 124 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 SNTNA6NMZ2 147 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 C12orf77C9JDV5 145 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 ZNF32P17041 273 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 PTMSP20962 102 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 CRISP3P54108 245 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 TNFRSF17Q02223 184 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 PDIA2Q13087 525 aaKnown RBP3.39□□□□□ -1.87
CCDC58-204ENST00000479414 KIAA0087Q14695 138 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 C6orf89Q6UWU4 347 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 TIFABQ6ZNK6 161 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 ARIH2OSQ8N7S6 290 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 Q8N9W7 124 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 LRRC58Q96CX6 371 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 CXorf40BQ96DE9 158 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 C12orf42Q96LP6 360 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 RPRD1AQ96P16 312 aaPredicted RBP3.39□□□□□ -1.87
CCDC58-204ENST00000479414 NPY6RQ99463 290 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 NRIP2Q9BQI9 281 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 SRMSQ9H3Y6 488 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 LY9Q9HBG7 655 aa3.39□□□□□ -1.87
CCDC58-204ENST00000479414 BTBD17A6NE02 478 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 FAM166BA8MTA8 275 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 MMP1P03956 469 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 TOP1P11387 765 aaKnown RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 TAGLN2P37802 199 aaKnown RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 GLP1RP43220 463 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 ARRB1P49407 418 aaPredicted RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 SH3BGRP55822 239 aaPredicted RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 BOLA3Q53S33 107 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 AGBL2Q5U5Z8 902 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 KHDRBS2Q5VWX1 349 aaKnown RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 OR2A2Q6IF42 318 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 FAM43BQ6ZT52 329 aaPredicted RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 THOC6Q86W42 341 aaKnown RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 EIF1ADQ8N9N8 165 aaKnown RBP3.38□□□□□ -1.87
CCDC58-204ENST00000479414 SDR9C7Q8NEX9 313 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 NPBQ8NG41 125 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 PANX2Q96RD6 677 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 FMO2Q99518 471 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 SIAEQ9HAT2 523 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 RAB26Q9ULW5 256 aa3.38□□□□□ -1.87
CCDC58-204ENST00000479414 ATAD2BQ9ULI0 1458 aa3.37□□□□□ -1.87
CCDC58-204ENST00000479414 A0A0G2JN53 185 aa3.37□□□□□ -1.87
CCDC58-204ENST00000479414 OR5B21A6NL26 309 aa3.37□□□□□ -1.87
CCDC58-204ENST00000479414 RIPK2O43353 540 aa3.37□□□□□ -1.87
CCDC58-204ENST00000479414 FCMRO60667 390 aa3.37□□□□□ -1.87
CCDC58-204ENST00000479414 PCCAP05165 728 aaPredicted RBP3.37□□□□□ -1.87
CCDC58-204ENST00000479414 DBTP11182 482 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms