RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 SLC16A4O15374 487 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 IDH3BO43837 385 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 TNNC2P02585 160 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 SNRPAP09012 282 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 BCKDHAP12694 445 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 GM2AP17900 193 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 DTYMKP23919 212 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 FASP25445 335 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 ZFP36P26651 326 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 GRIA3P42263 894 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PRELPP51888 382 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 B3GALT5-AS1P59052 145 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 RAB4BP61018 213 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 MRPS22P82650 360 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 RIPPLY1Q0D2K3 151 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 SCRN3Q0VDG4 424 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 MTF1Q14872 753 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PRTGQ2VWP7 1150 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 TMEM52BQ4KMG9 183 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 YIF1BQ5BJH7 314 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 FGD3Q5JSP0 725 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 RBM48Q5RL73 367 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PPM1LQ5SGD2 360 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 WASHC2DQ5SRD0 308 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 TIMM23BQ5SRD1 257 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 SDHAF4Q5VUM1 108 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 RESP18Q5W5W9 173 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 COX15Q7KZN9 410 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 APTXQ7Z2E3 356 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PEG10Q86TG7 708 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 ENTHD1Q8IYW4 607 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 LINC01561Q8N1V8 128 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 CLIP4Q8N3C7 705 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 Q8N402 240 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 IQCF1Q8N6M8 205 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 TPRX1Q8N7U7 411 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 TMEM255BQ8WV15 326 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 HGDQ93099 445 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 NTAN1Q96AB6 310 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 CMTM5Q96DZ9 223 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 ZBED6CLQ96FA7 236 aaPredicted RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 ITCHQ96J02 903 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 BBC3Q96PG8 261 aaPredicted RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 NEDD4LQ96PU5 975 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PRRT1Q99946 306 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 NHEJ1Q9H9Q4 299 aaPredicted RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 NRN1Q9NPD7 142 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 OLFML3Q9NRN5 406 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 C19orf12Q9NSK7 152 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 BABAM2Q9NXR7 383 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 UVRAGQ9P2Y5 699 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 EIF3KQ9UBQ5 218 aaKnown RBP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 STOML2Q9UJZ1 356 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 FBXL3Q9UKT7 428 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PPP1R3CQ9UQK1 317 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 SMARCA2P51531 1590 aa5.07□□□□□ -1.6
RC3H1-204ENST00000479099 PDS5AQ29RF7 1337 aaKnown RBP5.06□□□□□ -1.6
RC3H1-204ENST00000479099 SLC5A10A0PJK1 596 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 PSMB11A5LHX3 300 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 PP2D1A8MPX8 630 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 SMIM22K7EJ46 135 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 M0R036 132 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 PLPP3O14495 311 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 PEX11BO96011 259 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 TIMP1P01033 207 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 TFAP2AP05549 437 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 M6PRP20645 277 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 OR1E1P30953 314 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 FOXN2P32314 431 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 RBM34P42696 430 aaKnown RBP5.06□□□□□ -1.6
RC3H1-204ENST00000479099 CLDN6P56747 220 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 BACE1P56817 501 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 VLDLRP98155 873 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 POU3F1Q03052 451 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-204ENST00000479099 ST3GAL3Q11203 375 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 RAB40BQ12829 278 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 CRHR2Q13324 411 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 SPCS2Q15005 226 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 MAD2L1BPQ15013 274 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-204ENST00000479099 GUK1Q16774 197 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 ATP6V1FQ16864 119 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 GTDC1Q4AE62 458 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 Q4G0T1 1027 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 ATRAIDQ6UW56 229 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 AHSA2Q719I0 299 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 FAM57BQ71RH2 274 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 ASCL5Q7RTU5 278 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 HIPK1Q86Z02 1210 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 CMTM1Q8IZ96 169 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 TMEM251Q8N6I4 163 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 C15orf54Q8N8G6 183 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 OR2L5Q8NG80 312 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 OR4F17Q8NGA8 305 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 OR4F5Q8NH21 305 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 OR5AK3PQ8NH89 298 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 ACER1Q8TDN7 264 aa5.06□□□□□ -1.6
RC3H1-204ENST00000479099 SETD7Q8WTS6 366 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms