RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC52A3Q9NQ40 469 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 ZNF275Q9NSD4 429 aaPredicted RBP14.77□□□□□ -0.05
VIM-204ENST00000478746 RASD1Q9Y272 281 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 PRAMEF27A3QJZ7 478 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 RPL36A-HNRNPH2H7BZ11 118 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 CPSF4O95639 269 aaKnown RBP14.76□□□□□ -0.05
VIM-204ENST00000478746 CHRM4P08173 479 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 CAPZA2P47755 286 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 CLDN8P56748 225 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 EPS8Q12929 822 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 BNIP2Q12982 314 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 PRAMEF8Q5VWM4 474 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 PRAMEF7Q5VXH5 474 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 MDP1Q86V88 176 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 CCDC36Q8IYA8 594 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 RIBC1Q8N443 379 aaPredicted RBP14.76□□□□□ -0.05
VIM-204ENST00000478746 ZDHHC22Q8N966 263 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 SLC6A7Q99884 636 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 TXLNGYQ9BZA5 131 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 ESM1Q9NQ30 184 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 G6PC2Q9NQR9 355 aa14.76□□□□□ -0.05
VIM-204ENST00000478746 WNK2Q9Y3S1 2297 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 ZNF503-AS2A6NEH8 195 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 AGAP5A6NIR3 686 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 A8MVM7 634 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 NPHS1O60500 1241 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 GSNP06396 782 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 IL7RP16871 459 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 ALDH3B1P43353 468 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 SEC24CP53992 1094 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 GNA13Q14344 377 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 PDCD2Q16342 344 aaPredicted RBP14.75□□□□□ -0.05
VIM-204ENST00000478746 MSMPQ1L6U9 139 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 ACSM5Q6NUN0 579 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 TREML4Q6UXN2 200 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 C1QL2Q7Z5L3 287 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 BPIFB2Q8N4F0 458 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 NANPQ8TBE9 248 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 YIPF5Q969M3 257 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 TUBGCP3Q96CW5 907 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 SYT3Q9BQG1 590 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 DPY30Q9C005 99 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 MTHFD2LQ9H903 347 aaPredicted RBP14.75□□□□□ -0.05
VIM-204ENST00000478746 GPR35Q9HC97 309 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 DDX28Q9NUL7 540 aaKnown RBP14.75□□□□□ -0.05
VIM-204ENST00000478746 NOX1Q9Y5S8 564 aa14.75□□□□□ -0.05
VIM-204ENST00000478746 A0A0G2JK05 382 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 SLC43A1O75387 559 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 KRT4P19013 534 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 CHI3L1P36222 383 aaPredicted RBP14.74□□□□□ -0.05
VIM-204ENST00000478746 CLDN17P56750 224 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 UBA52P62987 128 aaKnown RBP14.74□□□□□ -0.05
VIM-204ENST00000478746 MRPS11P82912 194 aaKnown RBP14.74□□□□□ -0.05
VIM-204ENST00000478746 MAD2L1Q13257 205 aaPredicted RBP14.74□□□□□ -0.05
VIM-204ENST00000478746 SYPL1Q16563 259 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 SAXO2Q658L1 398 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 ANKRD46Q86W74 232 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 ZNF440Q8IYI8 595 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 KDM8Q8N371 416 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 GPR137CQ8N3F9 429 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 ANKFN1Q8N957 763 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 TRNT1Q96Q11 434 aaKnown RBP14.74□□□□□ -0.05
VIM-204ENST00000478746 ZNF416Q9BWM5 594 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 TMPRSS13Q9BYE2 586 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 SLC38A1Q9H2H9 487 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 MARCOQ9UEW3 520 aaPredicted RBP14.74□□□□□ -0.05
VIM-204ENST00000478746 PRDM4Q9UKN5 801 aa14.74□□□□□ -0.05
VIM-204ENST00000478746 A0A0G2JMP0 313 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 A0A0X1KG70 313 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 PRSS51A0A1B0GVH4 220 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 HMGN4O00479 90 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 ZNF432O94892 652 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 MPZL1O95297 269 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 TFPTP0C1Z6 253 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 HKR1P10072 659 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 ZNF43P17038 809 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 FPR2P25090 351 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 ALDH3A1P30838 453 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 GLRXP35754 106 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 EMX2Q04743 252 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 CEACAM16Q2WEN9 425 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 TRMT5Q32P41 509 aaKnown RBP14.73□□□□□ -0.05
VIM-204ENST00000478746 MIDNQ504T8 468 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 MRPL2Q5T653 305 aaKnown RBP14.73□□□□□ -0.05
VIM-204ENST00000478746 C1orf140Q5VVS0 124 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 LRP11Q86VZ4 500 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 C4orf33Q8N1A6 199 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 CADM2Q8N3J6 435 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 VPS37AQ8NEZ2 397 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 OR4M2Q8NGB6 313 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 OR8J2Q8NGG1 315 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 ZNF837Q96EG3 531 aaPredicted RBP14.73□□□□□ -0.05
VIM-204ENST00000478746 NEURL3Q96EH8 262 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 RHOXF2Q9BQY4 288 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 ZNF665Q9H7R5 613 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 NTN4Q9HB63 628 aa14.73□□□□□ -0.05
VIM-204ENST00000478746 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 FRS3O43559 492 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 PLPP2O43688 288 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 SHBGP04278 402 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms