RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 USB1Q9BQ65 265 aaKnown RBP16.45■□□□□ 0.22
SREBF1-212ENST00000478616 ZNF426Q9BUY5 554 aa16.45■□□□□ 0.22
SREBF1-212ENST00000478616 PCDHAC1Q9H158 963 aa16.45■□□□□ 0.22
SREBF1-212ENST00000478616 SLCO5A1Q9H2Y9 848 aa16.45■□□□□ 0.22
SREBF1-212ENST00000478616 SLC17A5Q9NRA2 495 aa16.45■□□□□ 0.22
SREBF1-212ENST00000478616 ZNF701Q9NV72 531 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-212ENST00000478616 RASD1Q9Y272 281 aa16.45■□□□□ 0.22
SREBF1-212ENST00000478616 TRAV36DV7A0A075B6V5 113 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 BBIP1A8MTZ0 92 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 OVOL3O00110 214 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 VAMP5O95183 116 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 CD8AP01732 235 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 SEC24CP53992 1094 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 CYLC2Q14093 348 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 ZNF672Q499Z4 452 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 ENTPD8Q5MY95 495 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 TMEM225Q6GV28 225 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 PATL1Q86TB9 770 aaKnown RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 CIARTQ8N365 385 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 BHLHE22Q8NFJ8 381 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 VANGL1Q8TAA9 524 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 PIGTQ969N2 578 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 GSX1Q9H4S2 264 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-212ENST00000478616 PARPBPQ9NWS1 579 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 RPS6KB2Q9UBS0 482 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 EDARQ9UNE0 448 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 CAPN7Q9Y6W3 813 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 ARFGEF3Q5TH69 2177 aa16.44■□□□□ 0.22
SREBF1-212ENST00000478616 LOC102725191A0A1B0GVB3 256 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 CPSF4LA6NMK7 179 aaKnown RBP16.43■□□□□ 0.22
SREBF1-212ENST00000478616 CLOCKO15516 846 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 NPPAP01160 153 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 CD3EP07766 207 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 MPGP29372 298 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 PTH2RP49190 550 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 HIKESHIQ53FT3 197 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 Q5PR19 223 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 ZNF613Q6PF04 617 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 TMEM123Q8N131 208 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 ADPRHL1Q8NDY3 354 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 C1orf162Q8NEQ5 155 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-212ENST00000478616 OR6S1Q8NH40 331 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 ADAMTS16Q8TE57 1224 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 OXGR1Q96P68 337 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 ALKBH3Q96Q83 286 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-212ENST00000478616 SMR3AQ99954 134 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 TMEM43Q9BTV4 400 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 C1QTNF6Q9BXI9 259 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 GSX2Q9BZM3 304 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 MYLK2Q9H1R3 596 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 ESRP2Q9H6T0 727 aaKnown RBP16.43■□□□□ 0.22
SREBF1-212ENST00000478616 TMEM27Q9HBJ8 222 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 CR1P17927 2039 aa16.43■□□□□ 0.22
SREBF1-212ENST00000478616 NSD1Q96L73 2696 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-212ENST00000478616 CIB4A0PJX0 185 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 ZNF503-AS2A6NEH8 195 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 SLC22A2O15244 555 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 CHP2O43745 196 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 SMPD2O60906 423 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 ZNF83P51522 516 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 CLDN17P56750 224 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 VEZF1Q14119 521 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 HSP90B2PQ58FF3 399 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 SWT1Q5T5J6 900 aaKnown RBP16.42■□□□□ 0.22
SREBF1-212ENST00000478616 NIPAL3Q6P499 406 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 H1FNTQ75WM6 255 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-212ENST00000478616 SLC30A8Q8IWU4 369 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 SLC15A3Q8IY34 581 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 BCL2L2Q92843 193 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-212ENST00000478616 PERPQ96FX8 193 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 TXNDC15Q96J42 360 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 EVA1AQ9H8M9 152 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 UPB1Q9UBR1 384 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 B3GALT5Q9Y2C3 310 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-212ENST00000478616 TLN2Q9Y4G6 2542 aa16.42■□□□□ 0.22
SREBF1-212ENST00000478616 FAM220BPB1ANY3 271 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 E7EQL1 145 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 ABCD4O14678 606 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 AIM2O14862 343 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 OR2T1O43869 369 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 SHOX2O60902 331 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-212ENST00000478616 COX4I1P13073 169 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 CD40P25942 277 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 C5orf46Q6UWT4 87 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 RANBP3LQ86VV4 465 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-212ENST00000478616 POMGNT2Q8NAT1 580 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 OR1K1Q8NGR3 316 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 MUCL1Q96DR8 90 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 OR2M2Q96R28 347 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 LINC00470Q9BZP3 86 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 MEPEQ9NQ76 525 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-212ENST00000478616 LAMP3Q9UQV4 416 aa16.41■□□□□ 0.22
SREBF1-212ENST00000478616 RPL36A-HNRNPH2H7BZ11 118 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 NME4O00746 187 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 PLPP3O14495 311 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 DRD4P21917 467 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 GYS2P54840 703 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 NCALDP61601 193 aa16.4■□□□□ 0.22
SREBF1-212ENST00000478616 MAPRE2Q15555 327 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms