RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ZNF417Q8TAU3 575 aa23.78■■□□□ 1.4
CCM2-211ENST00000478582 LIPHQ8WWY8 451 aa23.78■■□□□ 1.4
CCM2-211ENST00000478582 ACOT11Q8WXI4 607 aaPredicted RBP23.78■■□□□ 1.4
CCM2-211ENST00000478582 RNASE6Q93091 150 aaKnown RBP23.78■■□□□ 1.4
CCM2-211ENST00000478582 ZNF347Q96SE7 839 aa23.78■■□□□ 1.4
CCM2-211ENST00000478582 ZNF587Q96SQ5 575 aaPredicted RBP23.78■■□□□ 1.4
CCM2-211ENST00000478582 SEPHS2Q99611 448 aa23.78■■□□□ 1.4
CCM2-211ENST00000478582 ASPNQ9BXN1 380 aa23.78■■□□□ 1.4
CCM2-211ENST00000478582 FLVCR1Q9Y5Y0 555 aa23.78■■□□□ 1.4
CCM2-211ENST00000478582 KPNA4O00629 521 aaPredicted RBP23.77■■□□□ 1.4
CCM2-211ENST00000478582 SMNDC1O75940 238 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCM2-211ENST00000478582 CH25HO95992 272 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 FLOT2Q14254 428 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 LUZP2Q86TE4 346 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 C10orf53Q8N6V4 93 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 ZNF610Q8N9Z0 462 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 PFN4Q8NHR9 129 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 OPN3Q9H1Y3 402 aaPredicted RBP23.77■■□□□ 1.4
CCM2-211ENST00000478582 SEC14L4Q9UDX3 406 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 ZNF229Q9UJW7 825 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 APCP25054 2843 aa23.77■■□□□ 1.4
CCM2-211ENST00000478582 ENO4A6NNW6 628 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 LRRN3E7EW58 273 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 DIRAS1O95057 198 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 UMPSP11172 480 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 CBLP22681 906 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 SMIM11AP58511 58 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 CHRNB3Q05901 458 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 FAM98BQ52LJ0 330 aaKnown RBP23.76■■□□□ 1.39
CCM2-211ENST00000478582 ZNF474Q6S9Z5 364 aaPredicted RBP23.76■■□□□ 1.39
CCM2-211ENST00000478582 SLC46A3Q7Z3Q1 461 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 ZIC4Q8N9L1 334 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 OR9K2Q8NGE7 335 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 OR5J2Q8NH18 312 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 TMEM45BQ96B21 275 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 ZNF775Q96BV0 537 aaPredicted RBP23.76■■□□□ 1.39
CCM2-211ENST00000478582 OXGR1Q96P68 337 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 FANCFQ9NPI8 374 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 NANSQ9NR45 359 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 C20orf141Q9NUB4 165 aa23.76■■□□□ 1.39
CCM2-211ENST00000478582 C6orf203Q9P0P8 240 aaPredicted RBP23.76■■□□□ 1.39
CCM2-211ENST00000478582 NOSIPQ9Y314 301 aaKnown RBP23.76■■□□□ 1.39
CCM2-211ENST00000478582 ABCA12Q86UK0 2595 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 A0A087WUU8 490 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 MS4A18H0YCH9 400 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 ASAH2BP0C7U1 165 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 HOXB6P17509 224 aaKnown RBP23.75■■□□□ 1.39
CCM2-211ENST00000478582 OR3A2P47893 321 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 FOXD4Q12950 439 aaPredicted RBP23.75■■□□□ 1.39
CCM2-211ENST00000478582 MS4A18Q3C1V0 323 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 TFAP2EQ6VUC0 442 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 SLC7A13Q8TCU3 470 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 SGTBQ96EQ0 304 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 RBM24Q9BX46 236 aaKnown RBP23.75■■□□□ 1.39
CCM2-211ENST00000478582 C12orf49Q9H741 205 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 SLC24A3Q9HC58 644 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 ELOVL5Q9NYP7 299 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 B3GAT1Q9P2W7 334 aa23.75■■□□□ 1.39
CCM2-211ENST00000478582 CREBBPQ92793 2442 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 PLPP3O14495 311 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 OR7A10O76100 309 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 NTF4P34130 210 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 PRKCDQ05655 676 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 PMS2P3Q13401 168 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 MBOAT2Q6ZWT7 520 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 CREB3L2Q70SY1 520 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 GPAT4Q86UL3 456 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 STK32CQ86UX6 486 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 ADGRG5Q8IZF4 528 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 FUZQ9BT04 418 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 PARPBPQ9NWS1 579 aa23.74■■□□□ 1.39
CCM2-211ENST00000478582 FBN2P35556 2912 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 TCRBV3S1A0A5B6 114 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 RAP2AP10114 183 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 NQO1P15559 274 aaKnown RBP23.73■■□□□ 1.39
CCM2-211ENST00000478582 FUT1P19526 365 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 LSM11P83369 360 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCM2-211ENST00000478582 TLE4Q04727 773 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 ZP4Q12836 540 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 PODNL1Q6PEZ8 512 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 ZNF730Q6ZMV8 503 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 BEND4Q6ZU67 534 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 EPHX4Q8IUS5 362 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 NRMQ8IXM6 262 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 KDM8Q8N371 416 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 LRRC17Q8N6Y2 441 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 BPIFA2Q96DR5 249 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 LURAP1Q96LR2 239 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 GALNT8Q9NY28 637 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 TESMINQ9Y4I5 508 aa23.73■■□□□ 1.39
CCM2-211ENST00000478582 PIP5K1CO60331 668 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 MRPL33O75394 65 aaKnown RBP23.72■■□□□ 1.39
CCM2-211ENST00000478582 HIST1H2ABP04908 130 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 IFI30P13284 250 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 ZNF43P17038 809 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 PUDPQ08623 228 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 TBPL2Q6SJ96 375 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 HIST3H2AQ7L7L0 130 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 HIST1H2ACQ93077 130 aa23.72■■□□□ 1.39
CCM2-211ENST00000478582 ZNF385AQ96PM9 386 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms