RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LANCL3Q6ZV70 420 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CYS1Q717R9 158 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 DPY19L4Q7Z388 723 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 TMEM17Q86X19 198 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF584Q8IVC4 421 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZSCAN4Q8NAM6 433 aaPredicted RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 AGAP11Q8TF27 550 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PSMG2Q969U7 264 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 MYLPFQ96A32 169 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 C18orf25Q96B23 403 aaPredicted RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ELSPBP1Q96BH3 223 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 B3GALT6Q96L58 329 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 SENP8Q96LD8 212 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 RANBP9Q96S59 729 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 APOL2Q9BQE5 337 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CXCL16Q9H2A7 254 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PALMDQ9NP74 551 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 AGPAT3Q9NRZ7 376 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 UXTQ9UBK9 157 aaPredicted RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PRODH2Q9UF12 536 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CHRNA9Q9UGM1 479 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 MAB21L2Q9Y586 359 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 OTOGLQ3ZCN5 2332 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SHROOM3Q8TF72 1996 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 PCDH15Q96QU1 1955 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 A0A1W2PNV4 684 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF233A6NK53 670 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM74A7A6NL05 159 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 G3V3Y1 287 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 I3L4J1 428 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SAP18O00422 153 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZSCAN12O43309 604 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 EFNA2O43921 213 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 GPRIN2O60269 458 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 HUS1O60921 280 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 BCAS1O75363 584 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 NEBLO76041 1014 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 IGF1P05019 195 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 TPM3P06753 285 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 HBQ1P09105 142 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ALPIP09923 528 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 UMPSP11172 480 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CPN1P15169 458 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 WARSP23381 471 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CDH5P33151 784 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 HMGCLP35914 325 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ACVR1BP36896 505 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 PPP1R2P41236 205 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SYKP43405 635 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 TUFMP49411 452 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ACOT2P49753 483 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 RPL10AP62906 217 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 RPL8P62917 257 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CYP24A1Q07973 514 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 PUDPQ08623 228 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 TWF1Q12792 350 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SELPLGQ14242 412 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CHI3L2Q15782 390 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SNRNP35Q16560 246 aaKnown RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CFAP221Q4G0U5 840 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM74A3Q4VXF1 159 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZCWPW2Q504Y3 356 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM120AOSQ5T036 256 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF57Q68EA5 555 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CENPPQ6IPU0 288 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SCYL2Q6P3W7 929 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 MARCH9Q86YJ5 346 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SCFD1Q8WVM8 642 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 RLN3Q8WXF3 142 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 FGF13Q92913 245 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM122AQ96E09 287 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 SDSLQ96GA7 329 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 TMEM80Q96HE8 168 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 PKMYT1Q99640 499 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ACBD6Q9BR61 282 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 ALG12Q9BV10 488 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 TM2D1Q9BX74 207 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 RHOJQ9H4E5 214 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 MEAF6Q9HAF1 191 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 RRAGDQ9NQL2 400 aaPredicted RBP3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CUTCQ9NTM9 273 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 EXTL2Q9UBQ6 330 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 CDH9Q9ULB4 789 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 TRAF3IP3Q9Y228 551 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR10H1Q9Y4A9 318 aa3.05□□□□□ -1.92
CDC42BPA-212ENST00000478573 PTPRJQ12913 1337 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRP4O75096 1905 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 A0A1B0GVL5 298 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRRIQ3A6PVS8 624 aaPredicted RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 EFCAB7A8K855 629 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 STX7O15400 261 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 MAGEB3O15480 346 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 BCL2L11O43521 198 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR1F1O43749 312 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 CALUO43852 315 aaPredicted RBP3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 RHBDL1O75783 438 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 NOL4O94818 638 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC2A10O95528 541 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 ADCY5O95622 1261 aa3.04□□□□□ -1.92
CDC42BPA-212ENST00000478573 PRG2P13727 222 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms