RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 A4GNTQ9UNA3 340 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 SH3D21A4FU49 640 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ENO4A6NNW6 628 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 C11orf98E9PRG8 122 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 C16orf97H3BN30 126 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 FFAR1O14842 300 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 LYZL6O75951 148 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ADAP00813 363 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ADORA3P0DMS8 318 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 PRF1P14222 555 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF43P17038 809 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 AHCYP23526 432 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 NTF4P34130 210 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 OR3A2P47893 321 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 VLDLRP98155 873 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 POU3F1Q03052 451 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 LTBQ06643 244 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 PMS2P3Q13401 168 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 C1DQ13901 141 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MFSD13AQ14CX5 517 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 PDK3Q15120 406 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF74Q16587 644 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 FXNQ16595 210 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 SPATS1Q496A3 300 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 FGD3Q5JSP0 725 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 C9orf135Q5VTT2 229 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 LINC00114Q6XXX2 140 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 H1FNTQ75WM6 255 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MEX3DQ86XN8 651 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 OFCC1Q8IZS5 231 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ARHGAP24Q8N264 748 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 LRRC17Q8N6Y2 441 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF385AQ96PM9 386 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF426Q9BUY5 554 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 C1orf21Q9H246 121 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 FANCFQ9NPI8 374 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MEPEQ9NQ76 525 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 NANSQ9NR45 359 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MAN2C1Q9NTJ4 1040 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 C20orf141Q9NUB4 165 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ELOVL5Q9NYP7 299 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 PRPF19Q9UMS4 504 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 RASD1Q9Y272 281 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 B3GALT5Q9Y2C3 310 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 FAM32AQ9Y421 112 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 CORINQ9Y5Q5 1042 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ENPP4Q9Y6X5 453 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 OTOGQ6ZRI0 2925 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MYO9AB2RTY4 2548 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 KRT33AO76009 404 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 VAMP5O95183 116 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 OR6A2O95222 327 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 STAMBPO95630 424 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 HPRP00739 348 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 MT-ATP6P00846 226 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 MT-ND1P03886 318 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 HIST1H2ABP04908 130 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 HLA-DOBP13765 273 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 IL32P24001 234 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 DNAJA1P31689 397 aaKnown RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 PEX19P40855 299 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 RBM34P42696 430 aaKnown RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 SELENOPP49908 381 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 CLDN17P56750 224 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 TLE4Q04727 773 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 LGALS3BPQ08380 585 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 PUDPQ08623 228 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 FAPQ12884 760 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 TRIM25Q14258 630 aaKnown RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 TRAM2Q15035 370 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 STK11Q15831 433 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 DNAL1Q4LDG9 190 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 FBXW10Q5XX13 1052 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 NIPAL3Q6P499 406 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 STAC2Q6ZMT1 411 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 Q6ZT83 130 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 CREB3L2Q70SY1 520 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 HIST3H2AQ7L7L0 130 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 AAED1Q7RTV5 226 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 NANOGNBQ7Z5D8 188 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM200AQ86VY9 491 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 DHFR2Q86XF0 187 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 UEVLDQ8IX04 471 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 SCAIQ8N9R8 606 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 ACBD4Q8NC06 268 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 OR5J2Q8NH18 312 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 OR52J3Q8NH60 311 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 HIST1H2ACQ93077 130 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 KISS1RQ969F8 398 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 MCUR1Q96AQ8 359 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 SLC7A6OSQ96CW6 309 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 PYURFQ96I23 114 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 LRGUKQ96M69 825 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 ALKBH3Q96Q83 286 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 SEPHS2Q99611 448 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 BTBD10Q9BSF8 475 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 SF3B5Q9BWJ5 86 aaKnown RBP6.1□□□□□ -1.43
BRCA1-215ENST00000478531 SLC19A3Q9BZV2 496 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 ACTR6Q9GZN1 396 aa6.1□□□□□ -1.43
BRCA1-215ENST00000478531 NDUFAF4Q9P032 175 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms