RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 IFNA8P32881 189 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 UGT2B10P36537 528 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 VLDLRP98155 873 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 SORDQ00796 357 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ST3GAL3Q11203 375 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 PMS2P3Q13401 168 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 C1DQ13901 141 aaKnown RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF74Q16587 644 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 SPATS1Q496A3 300 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 STAC2Q6ZMT1 411 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 BEND4Q6ZU67 534 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 H1FNTQ75WM6 255 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 AAED1Q7RTV5 226 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 CYP4Z1Q86W10 505 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 CXorf67Q86X51 503 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 MEX3DQ86XN8 651 aaKnown RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 OFCC1Q8IZS5 231 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 GABRG1Q8N1C3 465 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ARHGAP24Q8N264 748 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 LRRC17Q8N6Y2 441 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ZIC4Q8N9L1 334 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 OR6S1Q8NH40 331 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 SLC7A6OSQ96CW6 309 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 PYURFQ96I23 114 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 SF3B5Q9BWJ5 86 aaKnown RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 SLC19A3Q9BZV2 496 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 C1orf21Q9H246 121 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 MAN2C1Q9NTJ4 1040 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 NDUFAF4Q9P032 175 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ACTR3BQ9P1U1 418 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 B3GAT1Q9P2W7 334 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 CORINQ9Y5Q5 1042 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ENPP4Q9Y6X5 453 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 DOCK7Q96N67 2140 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 SH3D21A4FU49 640 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 C11orf98E9PRG8 122 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 FZD7O75084 574 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 LYZL6O75951 148 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 PRSS23O95084 383 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 VAMP5O95183 116 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 MT-ND1P03886 318 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 SEMG1P04279 462 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 THRBP10828 461 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 HLA-DOBP13765 273 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 ZNF43P17038 809 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 FUT1P19526 365 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 AHCYP23526 432 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 RBM34P42696 430 aaKnown RBP9.08□□□□□ -0.96
HDAC6-222ENST00000478095 SELENOPP49908 381 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 CLDN17P56750 224 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 MS4A2Q01362 244 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 LGALS3BPQ08380 585 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 BNIP1Q12981 228 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 TRIM25Q14258 630 aaKnown RBP9.08□□□□□ -0.96
HDAC6-222ENST00000478095 MFSD13AQ14CX5 517 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 TRAM2Q15035 370 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 DNAL1Q4LDG9 190 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 C9orf135Q5VTT2 229 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 NIPAL3Q6P499 406 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 CREB3L2Q70SY1 520 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 SLC46A3Q7Z3Q1 461 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 DHFR2Q86XF0 187 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 EPHX4Q8IUS5 362 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 OR5J2Q8NH18 312 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 ZC3HAV1LQ96H79 300 aaKnown RBP9.08□□□□□ -0.96
HDAC6-222ENST00000478095 C7orf34Q96L11 122 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 WFIKKN1Q96NZ8 548 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 SEPHS2Q99611 448 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 MED18Q9BUE0 208 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 NANSQ9NR45 359 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 KCNN3Q9UGI6 736 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 B3GALT5Q9Y2C3 310 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 MED31Q9Y3C7 131 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 FAM32AQ9Y421 112 aaKnown RBP9.08□□□□□ -0.96
HDAC6-222ENST00000478095 TESMINQ9Y4I5 508 aa9.08□□□□□ -0.96
HDAC6-222ENST00000478095 ARHGAP21Q5T5U3 1957 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 TCRBV5S2A0A599 114 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 MS4A18H0YCH9 400 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 PLPP3O14495 311 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 TRAF3IP2O43734 574 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 OR7A10O76100 309 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FABP3P05413 133 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 ADORA3P0DMS8 318 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 IFI30P13284 250 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 IGHV1-2P23083 117 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 DNAJA1P31689 397 aaKnown RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 PEX19P40855 299 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FOXG1P55316 489 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 CBX1P83916 185 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 POU3F1Q03052 451 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-222ENST00000478095 TLE4Q04727 773 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 PUDPQ08623 228 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FAPQ12884 760 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 POU4F3Q15319 338 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 MS4A18Q3C1V0 323 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 IQCCQ4KMZ1 466 aa9.07□□□□□ -0.96
HDAC6-222ENST00000478095 FGD3Q5JSP0 725 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms