RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 UQCRBP14927 111 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 TCN1P20061 433 aaPredicted RBP17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 CRHR1P34998 444 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 CCT5P48643 541 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 EPS8Q12929 822 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 PRAMEF8Q5VWM4 474 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 PRAMEF7Q5VXH5 474 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 ACSM5Q6NUN0 579 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 FNDC5Q8NAU1 212 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 TAPBPLQ9BX59 468 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 DDX28Q9NUL7 540 aaKnown RBP17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 RCE1Q9Y256 329 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 RASD1Q9Y272 281 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 PRAMEF27A3QJZ7 478 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 CFAP73A6NFT4 308 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 AGAP5A6NIR3 686 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 RNASET2O00584 256 aaKnown RBP17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 NCR1O76036 304 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 ADRA2CP18825 462 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 CXCR1P25024 350 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 ALDH3B1P43353 468 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 PCLAFQ15004 111 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 PGS1Q32NB8 556 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 ZNF311Q5JNZ3 666 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 OR4F3Q6IEY1 312 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 CCDC36Q8IYA8 594 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 OR4A15Q8NGL6 344 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 NANPQ8TBE9 248 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 SYT3Q9BQG1 590 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 ZNF665Q9H7R5 613 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 NTN4Q9HB63 628 aa17.36■□□□□ 0.37
PDLIM1-202ENST00000477757 PLPP2O43688 288 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 ZNF432O94892 652 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 MPZL1O95297 269 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 FSHBP01225 129 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 CHRM4P08173 479 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 GSTA3Q16772 222 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 GPAT3Q53EU6 434 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 SAXO2Q658L1 398 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 C3orf30Q96M34 536 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 ZNF385DQ9H6B1 395 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 GPR35Q9HC97 309 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 MID2Q9UJV3 735 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 PPIAL4AQ9Y536 164 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 CORINQ9Y5Q5 1042 aa17.35■□□□□ 0.37
PDLIM1-202ENST00000477757 A8MVM7 634 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 TRIM13O60858 407 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 PRSS23O95084 383 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 G6PDP11413 515 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 RPS4Y1P22090 263 aaKnown RBP17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 GLRXP35754 106 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 SEC24CP53992 1094 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 MAD2L1BPQ15013 274 aaPredicted RBP17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 MRPL2Q5T653 305 aaKnown RBP17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 NOA1Q8NC60 698 aaKnown RBP17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 RNF217Q8TC41 542 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 RAB39BQ96DA2 213 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 NEURL3Q96EH8 262 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 SLC38A1Q9H2H9 487 aa17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 MYEF2Q9P2K5 600 aaKnown RBP17.34■□□□□ 0.37
PDLIM1-202ENST00000477757 DEAF1O75398 565 aaPredicted RBP17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF35P13682 527 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 UQCRC2P22695 453 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 CAPZA2P47755 286 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 CLDN8P56748 225 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 CLDN17P56750 224 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 RPS23P62266 143 aaKnown RBP17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 ZP4Q12836 540 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 BNIP2Q12982 314 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 GNA13Q14344 377 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 CEACAM16Q2WEN9 425 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 C1orf140Q5VVS0 124 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 DCAF12L2Q5VW00 463 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 AGR3Q8TD06 166 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF837Q96EG3 531 aaPredicted RBP17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 MS4A3Q96HJ5 214 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 TRNT1Q96Q11 434 aaKnown RBP17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 UNKLQ9H9P5 680 aaKnown RBP17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 B3GNT2Q9NY97 397 aa17.33■□□□□ 0.36
PDLIM1-202ENST00000477757 HMGN4O00479 90 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 COPEO14579 308 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 NPHS1O60500 1241 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 NPIPB7O75200 414 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 SLC43A1O75387 559 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 SEC14L2O76054 403 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 FPR2P25090 351 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 FXNQ16595 210 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 TUSC1Q2TAM9 212 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 LRP11Q86VZ4 500 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF440Q8IYI8 595 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 GPR137CQ8N3F9 429 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 ANKFN1Q8N957 763 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 OR8J2Q8NGG1 315 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 DVL3Q92997 716 aaPredicted RBP17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 ZMAT3Q9HA38 289 aaKnown RBP17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 ASIC5Q9NY37 505 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 PRDM4Q9UKN5 801 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF346Q9UL40 294 aaKnown RBP17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 NOX1Q9Y5S8 564 aa17.32■□□□□ 0.36
PDLIM1-202ENST00000477757 WNK2Q9Y3S1 2297 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms