RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IL1RL1Q01638 556 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 RPL18Q07020 188 aaKnown RBP14.46□□□□□ -0.09
VHL-203ENST00000477538 PUDPQ08623 228 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 COX10Q12887 443 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 FHL1Q13642 323 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 ANKDD1AQ495B1 522 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 C1orf185Q5T7R7 199 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 OGFRL1Q5TC84 451 aaPredicted RBP14.46□□□□□ -0.09
VHL-203ENST00000477538 FBXW10Q5XX13 1052 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 KDM4DQ6B0I6 523 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 ABLIM2Q6H8Q1 611 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 ZNF620Q6ZNG0 422 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 RASSF6Q6ZTQ3 369 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 P4HA3Q7Z4N8 544 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 CCDC103Q8IW40 242 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 FANK1Q8TC84 345 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 MAGEE2Q8TD90 523 aaPredicted RBP14.46□□□□□ -0.09
VHL-203ENST00000477538 RNF128Q8TEB7 428 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 TNFRSF13CQ96RJ3 184 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 SLC29A1Q99808 456 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 TP63Q9H3D4 680 aaPredicted RBP14.46□□□□□ -0.09
VHL-203ENST00000477538 MCCC2Q9HCC0 563 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 PAPOLBQ9NRJ5 636 aaKnown RBP14.46□□□□□ -0.09
VHL-203ENST00000477538 USE1Q9NZ43 259 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 HIVEP3Q5T1R4 2406 aa14.46□□□□□ -0.09
VHL-203ENST00000477538 KDM4EB2RXH2 506 aaPredicted RBP14.45□□□□□ -0.1
VHL-203ENST00000477538 C11orf98E9PRG8 122 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 MS4A18H0YCH9 400 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 CYTIPO60759 359 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 RAMP1O60894 148 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 AQP8O94778 261 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 ALPLP05186 524 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 HOXD4P09016 255 aaPredicted RBP14.45□□□□□ -0.1
VHL-203ENST00000477538 TSPAN19P0C672 248 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 FCGR2AP12318 317 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 IGFBP5P24593 272 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 AQP2P41181 271 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 ALDH3A2P51648 485 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 PRPS1P60891 318 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 TAF11Q15544 211 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 MS4A18Q3C1V0 323 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 NSUN5P2Q63ZY6 315 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 TMEM225Q6GV28 225 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 RPTNQ6XPR3 784 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 GALNT5Q7Z7M9 940 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 DOLPP1Q86YN1 238 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 SLC43A2Q8N370 569 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 MOSPD2Q8NHP6 518 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 NDEL1Q9GZM8 345 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 OR52D1Q9H346 318 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 CALHM2Q9HA72 323 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 TAS2R5Q9NYW4 299 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 KLHL13Q9P2N7 655 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 TMEFF2Q9UIK5 374 aaPredicted RBP14.45□□□□□ -0.1
VHL-203ENST00000477538 TINAGQ9UJW2 476 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 RASD1Q9Y272 281 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 FAM215AQ9Y5M1 114 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 CDH10Q9Y6N8 788 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 CFAP46Q8IYW2 2715 aa14.45□□□□□ -0.1
VHL-203ENST00000477538 NCOA6Q14686 2063 aaPredicted RBP14.45□□□□□ -0.1
VHL-203ENST00000477538 CHD6Q8TD26 2715 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 A0A1W2PNV4 684 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 CD8B2A6NJW9 211 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 RNF13O43567 381 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 MITFO75030 526 aaPredicted RBP14.44□□□□□ -0.1
VHL-203ENST00000477538 PTP4A3O75365 173 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 NDUFB2O95178 105 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 VAMP5O95183 116 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 RCBTB2O95199 551 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 SOX14O95416 240 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 TGM6O95932 706 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 HPRP00739 348 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 TP53P04637 393 aaPredicted RBP14.44□□□□□ -0.1
VHL-203ENST00000477538 AHCYP23526 432 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 CASP6P55212 293 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 FXYD6P3P58550 94 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 ZP4Q12836 540 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 MRPL49Q13405 166 aaKnown RBP14.44□□□□□ -0.1
VHL-203ENST00000477538 RTL6Q6ICC9 239 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 RPL13AP3Q6NVV1 102 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 SMARCD3Q6STE5 483 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 C3P1Q6ZMU1 363 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 GPAT4Q86UL3 456 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 KIF18BQ86Y91 864 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 MCEMP1Q8IX19 187 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 KDM8Q8N371 416 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 CLDN22Q8N7P3 220 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 ABHD3Q8WU67 409 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 NRG4Q8WWG1 115 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 WNT2BQ93097 391 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 OXGR1Q96P68 337 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 EGLN3Q9H6Z9 239 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 C8orf4Q9NR00 106 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 REV1Q9UBZ9 1251 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 SH3BGRL2Q9UJC5 107 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 ORC6Q9Y5N6 252 aa14.44□□□□□ -0.1
VHL-203ENST00000477538 TRGV8A0A0C4DH27 118 aa14.43□□□□□ -0.1
VHL-203ENST00000477538 OSMP13725 252 aa14.43□□□□□ -0.1
VHL-203ENST00000477538 ZNF26P17031 533 aaPredicted RBP14.43□□□□□ -0.1
VHL-203ENST00000477538 RAD23AP54725 363 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms