RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CDSNQ15517 529 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 OR4D1Q15615 310 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CHI3L2Q15782 390 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ZNF77Q15935 545 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 C3AR1Q16581 482 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DUSP6Q16828 381 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 UPP1Q16831 310 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SLC5A12Q1EHB4 618 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LRRC37A5PQ49AS3 106 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PIK3CD-AS1Q5SR53 167 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CLVS2Q5SYC1 327 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 C1orf220Q5T0J3 134 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DCST2Q5T1A1 773 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NT5DC1Q5TFE4 455 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 HHATQ5VTY9 493 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SLC22A10Q63ZE4 541 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NADSYN1Q6IA69 706 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NEPROQ6NW34 567 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TUBA3EQ6PEY2 450 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SPESP1Q6UW49 350 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 UQCC3Q6UW78 93 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ENPP6Q6UWR7 440 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 BTNL3Q6UXE8 466 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 Q6ZNB5 142 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 Q6ZRG5 221 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ZNF621Q6ZSS3 439 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SSX7Q7RTT5 188 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 FAM122BQ7Z309 247 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 OR2W3Q7Z3T1 314 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PEG10Q86TG7 708 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 ZNF546Q86UE3 836 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GLCCI1Q86VQ1 547 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ERICH1Q86X53 443 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 RNF113BQ8IZP6 322 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 FGFRL1Q8N441 504 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 FAM89BQ8N5H3 189 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CSNK1A1LQ8N752 337 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GVQW1Q8N7I0 195 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LRTM2Q8N967 370 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LRRC75AQ8NAA5 344 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ZSCAN4Q8NAM6 433 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 OR2AK2Q8NG84 335 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 OR52I1Q8NGK6 324 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 OR6K2Q8NGY2 324 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PHOSPHO2Q8TCD6 241 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TCP10LQ8TDR4 215 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SMAP2Q8WU79 429 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 NUDCD2Q8WVJ2 157 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ACOT11Q8WXI4 607 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 HAS1Q92839 578 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 BADQ92934 168 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DLX4Q92988 240 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 ART4Q93070 314 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 C18orf25Q96B23 403 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 TADA1Q96BN2 335 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CCDC126Q96EE4 140 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SNF8Q96H20 258 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 MED30Q96HR3 178 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ZFP3Q96NJ6 502 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SERPINB11Q96P15 392 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GNRHR2Q96P88 292 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CPXM1Q96SM3 734 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NEURL2Q9BR09 285 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NIPSNAP3BQ9BS92 247 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TIMM29Q9BSF4 260 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 MCRIP2Q9BUT9 160 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 TRAF4Q9BUZ4 470 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 GPR174Q9BXC1 333 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TSGA10Q9BZW7 698 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PPA2Q9H2U2 334 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 WDR54Q9H977 334 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GPN2Q9H9Y4 310 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 POPDC2Q9HBU9 364 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 UBE2TQ9NPD8 197 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 FZD3Q9NPG1 666 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ABCB10Q9NRK6 738 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 INPP5EQ9NRR6 644 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.54□□□□□ -2
HMGN4-202ENST00000477243 SAMSN1Q9NSI8 373 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 CUTCQ9NTM9 273 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PAQR5Q9NXK6 330 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 STMN3Q9NZ72 180 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GALPQ9UBC7 116 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 C19orf25Q9UFG5 118 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 CLEC2DQ9UHP7 191 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PURGQ9UJV8 347 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 PACSIN3Q9UKS6 424 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 AMDHD2Q9Y303 409 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GMPPBQ9Y5P6 360 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 R4GN57 208 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 V9GYQ6 96 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PCSK5Q92824 1860 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TAF1LQ8IZX4 1826 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TENM3Q9P273 2699 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 COL6A6A6NMZ7 2263 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 VPS8Q8N3P4 1428 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 CGNL1Q0VF96 1302 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 A0A0G2JNG1 304 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TRBV5-5A0A0J9YX44 114 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms