RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZNF160Q9HCG1 818 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HRASLSQ9HDD0 168 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 IL1RAPQ9NPH3 570 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 OR2S2Q9NQN1 319 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MIOSQ9NXC5 875 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 VNN3Q9NY84 501 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HAO2Q9NYQ3 351 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CCDC59Q9P031 241 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 VAPAQ9P0L0 249 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HCN3Q9P1Z3 774 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 EPHA6Q9UF33 1036 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC12A6Q9UHW9 1150 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RWDD2AQ9UIY3 292 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 GNPTGQ9UJJ9 305 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 OR52A1Q9UKL2 312 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 KLK13Q9UKR3 277 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CA5BQ9Y2D0 317 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PRG3Q9Y2Y8 225 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 GOLT1BQ9Y3E0 138 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ALG5Q9Y673 324 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TMEM56-RWDD3S4R434 201 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CARMIL3Q8ND23 1372 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SYNJ2O15056 1496 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MED14O60244 1454 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CCDC141Q6ZP82 1450 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ARHGAP35Q9NRY4 1499 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MYH7P12883 1935 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ZNFX1Q9P2E3 1918 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 SHROOM2Q13796 1616 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 FAM135AQ9P2D6 1515 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PTPRTO14522 1441 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PCF11O94913 1555 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 FANCAO15360 1455 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 KCNE1BA0A087WTH5 132 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 A0A087WW49 117 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 A0A0G2JNG1 304 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TRBV7-9A0A0J9YWB2 115 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TEX13DA0A0J9YY54 714 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 A0A1B0GV72 72 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 C13orf42A0A1B0GVH6 325 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 LNP1A1A4G5 178 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SIGLEC16A6NMB1 481 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZNF99A8MXY4 864 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 E7EWF7 191 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 NPIPA7E9PJI5 369 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 M0QZ92 97 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PHYHO14832 338 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SSX4O60224 188 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 KIAA0513O60268 411 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 LCMT2O60294 686 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 HUS1O60921 280 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SULT1C4O75897 302 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SRP72O76094 671 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 SEC24AO95486 1093 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ACSL3O95573 720 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FAM107AO95990 144 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ACTL6AO96019 429 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 GOT2P00505 430 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 TCRBP04435 133 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SERPINE2P07093 398 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ERCC1P07992 297 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 RD3LP0DJH9 198 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 NPIPA8P0DM63 369 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PNMTP11086 282 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SCGB1A1P11684 91 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 COX7A2P14406 83 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 KCNE1P15382 129 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZNF44P15621 663 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SPI1P17947 270 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TSPAN8P19075 237 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TPSB2P20231 275 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 OGNP20774 298 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 ZP3P21754 424 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PCMT1P22061 227 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 HTR2AP28223 471 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 GTF2E2P29084 291 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 HNRNPH3P31942 346 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 FCGR2BP31994 310 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 OR1D2P34982 312 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CHI3L1P36222 383 aaPredicted RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 UGT2B10P36537 528 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RPL35P42766 123 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 MAGEA3P43357 314 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CYB561P49447 251 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RGS6P49758 472 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 HLCSP50747 726 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TFAMQ00059 246 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 NAAAQ02083 359 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 DHODHQ02127 395 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 GUCY2DQ02846 1103 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 CHRNB3Q05901 458 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RBPJQ06330 500 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MZT1Q08AG7 82 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 RIPPLY1Q0D2K3 151 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FUT7Q11130 342 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PDIA2Q13087 525 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 SELENBP1Q13228 472 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 APOFQ13790 326 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 TFDP2Q14188 446 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 DPYSL3Q14195 570 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms