RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MVB12AQ96EY5 273 aa15.01□□□□□ -0.01
TMEM53-208ENST00000476724 OR1F2PQ96R84 312 aa15.01□□□□□ -0.01
TMEM53-208ENST00000476724 TRAF4Q9BUZ4 470 aaPredicted RBP15.01□□□□□ -0.01
TMEM53-208ENST00000476724 SPRTNQ9H040 489 aaPredicted RBP15.01□□□□□ -0.01
TMEM53-208ENST00000476724 LRRN3Q9H3W5 708 aa15.01□□□□□ -0.01
TMEM53-208ENST00000476724 C12orf10Q9HB07 376 aa15.01□□□□□ -0.01
TMEM53-208ENST00000476724 WDR70Q9NW82 654 aa15.01□□□□□ -0.01
TMEM53-208ENST00000476724 GNG8Q9UK08 70 aa15.01□□□□□ -0.01
TMEM53-208ENST00000476724 IGKV1D-42A0A075B6H8 117 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 ZNF879B4DU55 563 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 INMT-MINDY4F8WBC2 141 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 ZNF264O43296 627 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 CD14P08571 375 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 EPXP11678 715 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 EDNRAP25101 427 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 EPHA8P29322 1005 aaPredicted RBP15□□□□□ -0.01
TMEM53-208ENST00000476724 ERVK-25P63136 954 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 SKP2Q13309 424 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 GPR176Q14439 515 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 IL20RBQ6UXL0 311 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 KANSL1Q7Z3B3 1105 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 RFLNBQ8N5W9 214 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 METTL27Q8N6F8 245 aaPredicted RBP15□□□□□ -0.01
TMEM53-208ENST00000476724 PHOSPHO1Q8TCT1 267 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 UPRTQ96BW1 309 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 RNF170Q96K19 258 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 NDEL1Q9GZM8 345 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 NANSQ9NR45 359 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 LANCL2Q9NS86 450 aa15□□□□□ -0.01
TMEM53-208ENST00000476724 FRG2CA6NGY1 282 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 UBL3O95164 117 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 GLB1P16278 677 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 CSF2RBP32927 897 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 RPS11P62280 158 aaKnown RBP eCLIP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 SLC6A19Q695T7 634 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 JAZF1Q86VZ6 243 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 TMEM151BQ8IW70 566 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 GPR135Q8IZ08 494 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 CARFQ8N187 725 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 ASCC1Q8N9N2 400 aaKnown RBP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 RPS4Y2Q8TD47 263 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 FYTTD1Q96QD9 318 aaKnown RBP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 ABCG5Q9H222 651 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 ING3Q9NXR8 418 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 A0A1B0GTQ1 180 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 HYAL3O43820 417 aaPredicted RBP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 PAHP00439 452 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 ARSBP15848 533 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 ERP29P30040 261 aaKnown RBP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 DCAF7P61962 342 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 CD83Q01151 205 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 HSD17B12Q53GQ0 312 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 EMC4Q5J8M3 183 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 CEP78Q5JTW2 689 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 SNAP47Q5SQN1 464 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 OR13C5Q8NGS8 318 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 OR6K6Q8NGW6 343 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 LCORQ96JN0 433 aaPredicted RBP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 ABHD1Q96SE0 405 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 MMP25Q9NPA2 562 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 PNO1Q9NRX1 252 aaKnown RBP14.99□□□□□ -0.01
TMEM53-208ENST00000476724 CUTCQ9NTM9 273 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 SPATA2Q9UM82 520 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 CACNG2Q9Y698 323 aa14.99□□□□□ -0.01
TMEM53-208ENST00000476724 WDFY4Q6ZS81 3184 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 PATE3B3GLJ2 98 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 FAM47E-STBD1D6RA91 191 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 BLOC1S5-TXNDC5H3BN57 136 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 PDCD5O14737 125 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 SELENOFO60613 162 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 UTS2O95399 124 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 TXNDC12O95881 172 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 TACSTD2P09758 323 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 SDHAP31040 664 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 RCVRNP35243 200 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 SLC6A8P48029 635 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 MMP15P51511 669 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 RRAS2P62070 204 aaPredicted RBP14.98□□□□□ -0.01
TMEM53-208ENST00000476724 MRPL28Q13084 256 aaKnown RBP14.98□□□□□ -0.01
TMEM53-208ENST00000476724 CD226Q15762 336 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 HLA-BQ31612 363 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 PLA1AQ53H76 456 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 LINC01590Q5TEZ4 76 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 LEG1Q6P5S2 330 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 FAM122BQ7Z309 247 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 GLCCI1Q86VQ1 547 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 LRRC75AQ8NAA5 344 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 OR2I1PQ8NGU4 316 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 MOSPD2Q8NHP6 518 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 ZNRF4Q8WWF5 429 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 RASD2Q96D21 266 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 ALG12Q9BV10 488 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 LAT2Q9GZY6 243 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 TMEM165Q9HC07 324 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 RXFP3Q9NSD7 469 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 ACOXLQ9NUZ1 547 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 COPS3Q9UNS2 423 aa14.98□□□□□ -0.01
TMEM53-208ENST00000476724 TEX13CA0A0J9YWL9 993 aa14.97□□□□□ -0.01
TMEM53-208ENST00000476724 M0R296 226 aa14.97□□□□□ -0.01
TMEM53-208ENST00000476724 MAGEB4O15481 346 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms