RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TRAPPC13A5PLN9 417 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 PCNX2A6NKB5 2137 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 F5H0A9 414 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 HSPB6O14558 160 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 TOR1AO14656 332 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 SSX5O60225 188 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 SLC16A7O60669 478 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 CTSVO60911 334 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 FBXO24O75426 580 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF35P13682 527 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 RPA2P15927 270 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 BCKDHBP21953 392 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 GABRA5P31644 462 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 SLC7A9P82251 487 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 OR7A5Q15622 319 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 MLF2Q15773 248 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 C1QL3Q5VWW1 255 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 Q6ZNB5 142 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 MISPQ8IVT2 679 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM185AQ8NFB2 350 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 TSTD1Q8NFU3 115 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 OR4S1Q8NGB4 309 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 OR10AC1Q8NH08 325 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 S100A16Q96FQ6 103 aaKnown RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 TOE1Q96GM8 510 aaKnown RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ATF6BQ99941 703 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 APOOQ9BUR5 198 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 PHF7Q9BWX1 381 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 Q9N2J8 555 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 PFDN2Q9UHV9 154 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 SCN8AQ9UQD0 1980 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 ERVH48-1M5A8F1 160 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 CLDN4O14493 209 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 GMDSO60547 372 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 WNT1P04628 370 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 MSL3P1P0C860 447 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 POU3F2P20265 443 aaPredicted RBP4.59□□□□□ -1.68
CCDC39-204ENST00000476379 HSD3B2P26439 372 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 ERP29P30040 261 aaKnown RBP4.59□□□□□ -1.68
CCDC39-204ENST00000476379 HTR4Q13639 388 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 KCNC3Q14003 757 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 EIF4HQ15056 248 aaKnown RBP4.59□□□□□ -1.68
CCDC39-204ENST00000476379 PDCD1Q15116 288 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 NSDHLQ15738 373 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 GLYR1Q49A26 553 aaPredicted RBP4.59□□□□□ -1.68
CCDC39-204ENST00000476379 VWA2Q5GFL6 755 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 TCTE1Q5JU00 501 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 PRAMEF20Q5VT98 475 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 CDCP2Q5VXM1 449 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF322Q6U7Q0 402 aaPredicted RBP4.59□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF783Q6ZMS7 281 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 CCDC190Q86UF4 302 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 SLC35F2Q8IXU6 374 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 NRSN1Q8IZ57 195 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 OR7G1Q8NGA0 311 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 FCAMRQ8WWV6 532 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 TBC1D20Q96BZ9 403 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 CMBLQ96DG6 245 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 MS4A3Q96HJ5 214 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 TEAD3Q99594 435 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 MAP3K3Q99759 626 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 C1QTNF7Q9BXJ2 289 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 SLC38A1Q9H2H9 487 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 PLEKHA1Q9HB21 404 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 NOX3Q9HBY0 568 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 PRTFDC1Q9NRG1 225 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 ASF1BQ9NVP2 202 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 CALML5Q9NZT1 146 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 KLF15Q9UIH9 416 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 CDH10Q9Y6N8 788 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 V9GYH0 126 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 PTPRSQ13332 1948 aa4.59□□□□□ -1.68
CCDC39-204ENST00000476379 A0A0A6YYH2 397 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 PRSS38A1L453 326 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 A6NJ64 397 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 C5orf67F2Z3F1 127 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GDF9O60383 454 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 HPXP02790 462 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CT62P0C5K7 136 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ATF1P18846 271 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ACHEP22303 614 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 F8A1P23610 371 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 PUDPQ08623 228 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 RUNX2Q13950 521 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SLC9A3R2Q15599 337 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CDKN3Q16667 212 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 SPATS1Q496A3 300 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GGTA1PQ4G0N0 100 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 GLT8D1Q68CQ7 371 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF776Q68DI1 518 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-204ENST00000476379 COX15Q7KZN9 410 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 VASH2Q86V25 355 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM17Q86X19 198 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 PM20D2Q8IYS1 436 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 ZBTB44Q8NCP5 570 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR10H5Q8NGA6 315 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OR4C3Q8NH37 302 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 UBTD2Q8WUN7 234 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 OVCA2Q8WZ82 227 aa4.58□□□□□ -1.68
CCDC39-204ENST00000476379 CNN2Q99439 309 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms