RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 A0A096LPI6 279 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 ARPC4-TTLL3A0A0A6YYG9 625 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 SLC35F4A4IF30 521 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 MS4A18H0YCH9 400 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 RPL36A-HNRNPH2H7BZ11 118 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 VAMP5O95183 116 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 ANP32DO95626 131 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 HPRP00739 348 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 TP53P04637 393 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-207ENST00000475549 CECR9P0C854 216 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 IGHV4-31P0DP07 118 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 HLA-DOBP13765 273 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 NCF2P19878 526 aaPredicted RBP6.1□□□□□ -1.43
HDAC3-207ENST00000475549 SERPINF1P36955 418 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 CLDN17P56750 224 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 DSCR9P59020 149 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 COPZ1P61923 177 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 ARF1P84077 181 aaKnown RBP6.1□□□□□ -1.43
HDAC3-207ENST00000475549 NAAAQ02083 359 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 ADIPOQQ15848 244 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 MSMPQ1L6U9 139 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 MS4A18Q3C1V0 323 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 C6orf10Q5SRN2 563 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 LRIF1Q5T3J3 769 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 PRAMEF8Q5VWM4 474 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 PRAMEF7Q5VXH5 474 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 NIPAL3Q6P499 406 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 BLOC1S3Q6QNY0 202 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 CLEC2AQ6UVW9 174 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 DLEU7Q6UYE1 221 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 MSANTD1Q6ZTZ1 278 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 CROCCP2Q86T23 111 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 PHC2Q8IXK0 858 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 DEPDC4Q8N2C3 294 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 MIER2Q8N344 545 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 LSMEM1Q8N8F7 131 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 ANKS4BQ8N8V4 417 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 FBXO17Q96EF6 278 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 FOXN4Q96NZ1 517 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 SORCS2Q96PQ0 1159 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 SLC38A2Q96QD8 506 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 SOX7Q9BT81 388 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 TAPBPLQ9BX59 468 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 LINC00470Q9BZP3 86 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 RMND5AQ9H871 391 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 FKRPQ9H9S5 495 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 SLCO1B3Q9NPD5 702 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 CA10Q9NS85 328 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 CALML5Q9NZT1 146 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 RASD1Q9Y272 281 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 IFT52Q9Y366 437 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 GMEB1Q9Y692 573 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 ABCA1O95477 2261 aa6.1□□□□□ -1.43
HDAC3-207ENST00000475549 IGHV4-61A0A0C4DH41 118 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 LOC102725191A0A1B0GVB3 256 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 A0A1B0GWA3 101 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM129A0AVI4 362 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF587BE7ETH6 402 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 M0R082 166 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 TRAF3IP2O43734 574 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 KRT33AO76009 404 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 WNT11O96014 354 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 IGKV3-15P01624 115 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 OR4A8P0C604 315 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ETS2P15036 469 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 SLC25A16P16260 332 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 GPX2P18283 190 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 USF1P22415 310 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 CBLP22681 906 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 GRPRP30550 384 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 PRKAR1BP31321 381 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 AQP5P55064 265 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ROR2Q01974 943 aaKnown RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 FADDQ13158 208 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZSWIM7Q19AV6 140 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 CHRFAM7AQ494W8 412 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 C1QTNF12Q5T7M4 302 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 CYB5R2Q6BCY4 276 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM123Q8N131 208 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZCCHC24Q8N2G6 241 aaKnown RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ANKK1Q8NFD2 765 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 NFKBIDQ8NI38 313 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF417Q8TAU3 575 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 MAGEE2Q8TD90 523 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 PROX1Q92786 737 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 SLC35B4Q969S0 331 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 SLC41A3Q96GZ6 507 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 TXNDC15Q96J42 360 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 C7orf26Q96N11 449 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF75AQ96N20 296 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 OXGR1Q96P68 337 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 OR2M2Q96R28 347 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF587Q96SQ5 575 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-207ENST00000475549 DOK1Q99704 481 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 KATNB1Q9BVA0 655 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 PLK3Q9H4B4 646 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 CRLF2Q9HC73 371 aa6.09□□□□□ -1.43
HDAC3-207ENST00000475549 GPR35Q9HC97 309 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms