RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CHMLP26374 656 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 CD1BP29016 333 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 OTX1P32242 354 aaPredicted RBP4.07□□□□□ -1.76
SMC5-203ENST00000475540 GCKP35557 465 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 NUP62P37198 522 aaPredicted RBP4.07□□□□□ -1.76
SMC5-203ENST00000475540 SLC11A1P49279 550 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 RAB9AP51151 201 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 CDH6P55285 790 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 RIPPLY1Q0D2K3 151 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 EGFEM1PQ0D2K5 195 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 MPPED2Q15777 294 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 CHRNA6Q15825 494 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 LIPNQ5VXI9 398 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 ACSM5Q6NUN0 579 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 IL34Q6ZMJ4 242 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 SSX9Q7RTT3 188 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 DHDDSQ86SQ9 333 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 GTPBP8Q8N3Z3 284 aaPredicted RBP4.07□□□□□ -1.76
SMC5-203ENST00000475540 OR9A1PQ8NGU1 263 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 SLC38A4Q969I6 547 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 C19orf60Q96EN9 201 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 SIKE1Q9BRV8 207 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 TMEM121Q9BTD3 319 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 NARFLQ9H6Q4 476 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 CHRAC1Q9NRG0 131 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 MRPL22Q9NWU5 206 aaKnown RBP4.07□□□□□ -1.76
SMC5-203ENST00000475540 IL36GQ9NZH8 169 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 RASD1Q9Y272 281 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 STK38LQ9Y2H1 464 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 GOLGA8TH3BQL2 631 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 AKR7A2O43488 359 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 LGI1O95970 557 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 F10P00742 488 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 CCDC172P0C7W6 258 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 ATP1B2P14415 290 aaPredicted RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 PRKACAP17612 351 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 KIR2DS2P43631 304 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 DUSP3P51452 185 aaPredicted RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 LIM2P55344 173 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 CLDN8P56748 225 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 SLC15A2Q16348 729 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 MICBQ29980 383 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 TRIM69Q86WT6 500 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 C17orf82Q86X59 251 aaPredicted RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 MICU2Q8IYU8 434 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 C15orf54Q8N8G6 183 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 SPERTQ8NA61 448 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 OR2AP1Q8NGE2 309 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 LRRC39Q96DD0 335 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 TM4SF19Q96DZ7 209 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 SLC35E1Q96K37 410 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 IFT74Q96LB3 600 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 MTMR9Q96QG7 549 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 HAUS4Q9H6D7 363 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 AZI2Q9H6S1 392 aa4.06□□□□□ -1.76
SMC5-203ENST00000475540 TDRD3Q9H7E2 651 aaKnown RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 PSMC3IPQ9P2W1 217 aaPredicted RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 PACSIN2Q9UNF0 486 aaPredicted RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 CSDC2Q9Y534 153 aaKnown RBP4.06□□□□□ -1.76
SMC5-203ENST00000475540 CCDC182A6NF36 153 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 USP27XA6NNY8 438 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 F5H6K3 240 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 G3V4G9 280 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 POLR3GO15318 223 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 PRKAB2O43741 272 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 EFNA2O43921 213 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 CA1P00915 261 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 UBTFL6P0CB48 400 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 PSG2P11465 335 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 MSR1P21757 451 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 BTDP43251 543 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 PLP1P60201 277 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 KLRC3Q07444 240 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 SLC5A12Q1EHB4 618 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 KLHL38Q2WGJ6 581 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 NKAIN1Q4KMZ8 207 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 TP53I3Q53FA7 332 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 FAHD2BQ6P2I3 314 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 IQCF2Q8IXL9 164 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 SLC35F2Q8IXU6 374 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 DRAXINQ8NBI3 349 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 OR2T33Q8NG76 320 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 OR2L3Q8NG85 312 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 OR7G2Q8NG99 324 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 ELMO1Q92556 727 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 DCUN1D4Q92564 292 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 SGK3Q96BR1 496 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 FAHD2AQ96GK7 314 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 NIPSNAP3BQ9BS92 247 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 C20orf24Q9BUV8 137 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 TRIM62Q9BVG3 475 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 SLC25A39Q9BZJ4 359 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 ILKAPQ9H0C8 392 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 BLZF1Q9H2G9 400 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 ANKRA2Q9H9E1 313 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 NT5MQ9NPB1 228 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 LZTFL1Q9NQ48 299 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 PDP1Q9P0J1 537 aaPredicted RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 SLC7A8Q9UHI5 535 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 KLK12Q9UKR0 248 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms