RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 GPR137CQ8N3F9 429 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 CLDND2Q8NHS1 167 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 TESCQ96BS2 214 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 SLC25A36Q96CQ1 311 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 AHSA1O95433 338 aa17.65■□□□□ 0.42
VPS36-203ENST00000475375 IGFBP1P08833 259 aaPredicted RBP17.65■□□□□ 0.42
VPS36-203ENST00000475375 RPS4Y1P22090 263 aaKnown RBP17.65■□□□□ 0.42
VPS36-203ENST00000475375 GTF2E2P29084 291 aaKnown RBP17.65■□□□□ 0.42
VPS36-203ENST00000475375 S100A3P33764 101 aa17.65■□□□□ 0.42
VPS36-203ENST00000475375 WBP2NLQ6ICG8 309 aa17.65■□□□□ 0.42
VPS36-203ENST00000475375 TRIML2Q8N7C3 387 aa17.65■□□□□ 0.42
VPS36-203ENST00000475375 PNPT1Q8TCS8 783 aaKnown RBP17.65■□□□□ 0.42
VPS36-203ENST00000475375 NOX3Q9HBY0 568 aa17.65■□□□□ 0.42
VPS36-203ENST00000475375 REV1Q9UBZ9 1251 aa17.65■□□□□ 0.42
VPS36-203ENST00000475375 CCDC154A6NI56 674 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 TMEM229AB2RXF0 380 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 M0R233 179 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 KCNAB3O43448 404 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 SYNGR3O43761 229 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 SLC43A1O75387 559 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 SEC14L2O76054 403 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 MSMBP08118 114 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 NUDT17P0C025 328 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 TFPTP0C1Z6 253 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 SAGP10523 405 aaPredicted RBP17.64■□□□□ 0.41
VPS36-203ENST00000475375 ZNF43P17038 809 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 TCN1P20061 433 aaPredicted RBP17.64■□□□□ 0.41
VPS36-203ENST00000475375 COMPP49747 757 aaPredicted RBP17.64■□□□□ 0.41
VPS36-203ENST00000475375 CLNS1AP54105 237 aaKnown RBP17.64■□□□□ 0.41
VPS36-203ENST00000475375 DPY19L1Q2PZI1 675 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 ATG16L1Q676U5 607 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 CARM1Q86X55 608 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 VRK2Q86Y07 508 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 IL17RDQ8NFM7 739 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 OR52P1PQ8NH57 321 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 ZIM3Q96PE6 472 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 LRRC37BQ96QE4 947 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 PANX1Q96RD7 426 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 GPR35Q9HC97 309 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 PCDHB10Q9UN67 800 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 SPEF1Q9Y4P9 236 aa17.64■□□□□ 0.41
VPS36-203ENST00000475375 CDHR4A6H8M9 788 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 ZNF503-AS2A6NEH8 195 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 FAM157AC9JC47 383 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 E9PBE3 544 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 TRIM77I1YAP6 450 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 PNMTP11086 282 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 CREB1P16220 341 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 C1DQ13901 141 aaKnown RBP17.63■□□□□ 0.41
VPS36-203ENST00000475375 CEACAM16Q2WEN9 425 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 LIN52Q52LA3 116 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 ELFN2Q5R3F8 820 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 FAHD2BQ6P2I3 314 aaPredicted RBP17.63■□□□□ 0.41
VPS36-203ENST00000475375 ZNF836Q6ZNA1 936 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 ZNF621Q6ZSS3 439 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 PEG10Q86TG7 708 aaKnown RBP17.63■□□□□ 0.41
VPS36-203ENST00000475375 ANKK1Q8NFD2 765 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 OR51F2Q8NH61 342 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 FAHD2AQ96GK7 314 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 CCDC115Q96NT0 180 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 MRPL37Q9BZE1 423 aaKnown RBP17.63■□□□□ 0.41
VPS36-203ENST00000475375 TREM2Q9NZC2 230 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 USP22Q9UPT9 525 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 RCE1Q9Y256 329 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 NOX1Q9Y5S8 564 aa17.63■□□□□ 0.41
VPS36-203ENST00000475375 A0A096LPI6 279 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 RPL36A-HNRNPH2H7BZ11 118 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 TFP02787 698 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 BPGMP07738 259 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 NR4A1P22736 598 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 ACAA2P42765 397 aaKnown RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 RPS5P46782 204 aaKnown RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 NME5P56597 212 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 TXNL4AP83876 142 aaKnown RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 SLC9B1Q4ZJI4 515 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 COX20Q5RI15 118 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 CCDC36Q8IYA8 594 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 FAM216AQ8WUB2 273 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 MRPL24Q96A35 216 aaKnown RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 ZNF837Q96EG3 531 aaPredicted RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 SYT3Q9BQG1 590 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 RBM4Q9BWF3 364 aaKnown RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 MS4A5Q9H3V2 200 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 CACYBPQ9HB71 228 aaKnown RBP17.62■□□□□ 0.41
VPS36-203ENST00000475375 BTNL2Q9UIR0 455 aa17.62■□□□□ 0.41
VPS36-203ENST00000475375 TMEM89A2RUT3 159 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 PPIHO43447 177 aaKnown RBP17.61■□□□□ 0.41
VPS36-203ENST00000475375 HPXP02790 462 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 GSNP06396 782 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 CD79AP11912 226 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 PRG2P13727 222 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 EPHA1P21709 976 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 COL8A2P25067 703 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 ALDH3B1P43353 468 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 POU3F1Q03052 451 aaPredicted RBP17.61■□□□□ 0.41
VPS36-203ENST00000475375 GKAP1Q5VSY0 366 aaPredicted RBP17.61■□□□□ 0.41
VPS36-203ENST00000475375 NUDCD3Q8IVD9 361 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 LRRC34Q8IZ02 419 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 ZNF781Q8N8C0 355 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 MFSD8Q8NHS3 518 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms