RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PIP5K1AQ99755 562 aa15.01□□□□□ -0.01
SCAF11-206ENST00000474828 FNDC11Q9BVV2 318 aa15.01□□□□□ -0.01
SCAF11-206ENST00000474828 RBM24Q9BX46 236 aaKnown RBP15.01□□□□□ -0.01
SCAF11-206ENST00000474828 OR10A4Q9H209 315 aa15.01□□□□□ -0.01
SCAF11-206ENST00000474828 SLC24A3Q9HC58 644 aa15.01□□□□□ -0.01
SCAF11-206ENST00000474828 SEC14L4Q9UDX3 406 aa15.01□□□□□ -0.01
SCAF11-206ENST00000474828 A0A087WUU8 490 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 LRRN3E7EW58 273 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 PDLIM1O00151 329 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 PLPP3O14495 311 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 ZNF432O94892 652 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 HOXB6P17509 224 aaKnown RBP15□□□□□ -0.01
SCAF11-206ENST00000474828 PSMB1P20618 241 aaKnown RBP15□□□□□ -0.01
SCAF11-206ENST00000474828 EDNRAP25101 427 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 HMGA2P52926 109 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 PRKCDQ05655 676 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 TMEM225Q6GV28 225 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 CYP2R1Q6VVX0 501 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 Q6ZT83 130 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 LUZP2Q86TE4 346 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 KIF18BQ86Y91 864 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 OR5J2Q8NH18 312 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 SLC25A36Q96CQ1 311 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 BOD1Q96IK1 185 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 C20orf141Q9NUB4 165 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 PARPBPQ9NWS1 579 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 MALT1Q9UDY8 824 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 SLC7A8Q9UHI5 535 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 POMPQ9Y244 141 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 RCE1Q9Y256 329 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 MED31Q9Y3C7 131 aa15□□□□□ -0.01
SCAF11-206ENST00000474828 TRAF3IP2O43734 574 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 SMNDC1O75940 238 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 HPRP00739 348 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 H1F0P07305 194 aaKnown RBP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 COX5AP20674 150 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 COL8A1P27658 744 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 CCKARP32238 428 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 YAP1P46937 504 aaKnown RBP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 LIMS1P48059 325 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 RPS4XP62701 263 aaKnown RBP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 LSM11P83369 360 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 FHL1Q13642 323 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 P2RY6Q15077 328 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 STAC2Q6ZMT1 411 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 TMPRSS11FQ6ZWK6 438 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 MBOAT2Q6ZWT7 520 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 PXKQ7Z7A4 578 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 STK32CQ86UX6 486 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 PFN4Q8NHR9 129 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 ZNF385AQ96PM9 386 aaKnown RBP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 ZNF347Q96SE7 839 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 ASPNQ9BXN1 380 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 NANSQ9NR45 359 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 TAS2R5Q9NYW4 299 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 NOSIPQ9Y314 301 aaKnown RBP14.99□□□□□ -0.01
SCAF11-206ENST00000474828 FBN2P35556 2912 aa14.99□□□□□ -0.01
SCAF11-206ENST00000474828 ANKHD1Q8IWZ3 2542 aaKnown RBP14.98□□□□□ -0.01
SCAF11-206ENST00000474828 TCRBV3S1A0A5B6 114 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 ENO4A6NNW6 628 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 OR7A10O76100 309 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 CH25HO95992 272 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 FABP3P05413 133 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 UMPSP11172 480 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 UQCRC1P31930 480 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 UGT2B10P36537 528 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 PUDPQ08623 228 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 FAM27E3Q08E93 113 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 ANKDD1AQ495B1 522 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 FBXW9Q5XUX1 488 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 ADGRG5Q8IZF4 528 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 LRRC17Q8N6Y2 441 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 RNF217Q8TC41 542 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 CCDC124Q96CT7 223 aaKnown RBP14.98□□□□□ -0.01
SCAF11-206ENST00000474828 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-206ENST00000474828 RHCGQ9UBD6 479 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 KCNN3Q9UGI6 736 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 FAM32AQ9Y421 112 aaKnown RBP14.98□□□□□ -0.01
SCAF11-206ENST00000474828 NOX1Q9Y5S8 564 aa14.98□□□□□ -0.01
SCAF11-206ENST00000474828 FAM221AA4D161 298 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 NPIPB13A6NJU9 1138 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 NPIPB4C9JG80 1138 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 hCG_2039718K7EN88 272 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 HNRNPRO43390 633 aaKnown RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 KLF4O43474 513 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 MRPL33O75394 65 aaKnown RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 GTF2E2P29084 291 aaKnown RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 SMIM11AP58511 58 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 CBX1P83916 185 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 PMS2P3Q13401 168 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 MEX3BQ6ZN04 569 aaKnown RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 ZDHHC21Q8IVQ6 265 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 ZNF295-AS1Q8N0V1 137 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 PAPD5Q8NDF8 572 aaKnown RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 ANKK1Q8NFD2 765 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 MCUR1Q96AQ8 359 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 APH1AQ96BI3 265 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 ZNF775Q96BV0 537 aaPredicted RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 BPIFA2Q96DR5 249 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 SGTBQ96EQ0 304 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms