RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 FKBP9P1Q75LS8 142 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 HIST3H2AQ7L7L0 130 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 P2RY8Q86VZ1 359 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 UEVLDQ8IX04 471 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 ZIC4Q8N9L1 334 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 NINJ1Q92982 152 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 HIST1H2ACQ93077 130 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 ESRP2Q9H6T0 727 aaKnown RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 CCM2LQ9NUG4 571 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 SEC14L4Q9UDX3 406 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 MALT1Q9UDY8 824 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 TAGLN3Q9UI15 199 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 TACC2O95359 2948 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 OR6C65A6NJZ3 312 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 KPNA4O00629 521 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 SIAH2O43255 324 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 KLF4O43474 513 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 MT-ATP6P00846 226 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 BGLAPP02818 100 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 UMPSP11172 480 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 CDH2P19022 906 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 COX5AP20674 150 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 AHCYP23526 432 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 IST1P53990 364 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 TIMM23BQ5SRD1 257 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 PAMR1Q6UXH9 720 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 LINC00114Q6XXX2 140 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 SCAIQ8N9R8 606 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 POLR2J2Q9GZM3 115 aaKnown RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 PCDHAC1Q9H158 963 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 POLR2J3Q9H1A7 115 aaKnown RBP12.54□□□□□ -0.4
VAMP4-203ENST00000474047 RIMS3Q9UJD0 308 aa12.54□□□□□ -0.4
VAMP4-203ENST00000474047 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 ZNF587BE7ETH6 402 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 CH25HO95992 272 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 CD3EP07766 207 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 SELENOPP49908 381 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 ART1P52961 327 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 PIN1Q13526 163 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-203ENST00000474047 C8orf82Q6P1X6 216 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-203ENST00000474047 EPHX4Q8IUS5 362 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 ADPRHL1Q8NDY3 354 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 OR52N5Q8NH56 324 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 NANSQ9NR45 359 aa12.53□□□□□ -0.4
VAMP4-203ENST00000474047 MRPL39Q9NYK5 338 aaKnown RBP12.53□□□□□ -0.4
VAMP4-203ENST00000474047 OR5H1A6NKK0 313 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 CLOCKO15516 846 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 SLC43A1O75387 559 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 SERPINI2O75830 405 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 OR5F1O95221 314 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 SERPINA1P01009 418 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 IFNW1P05000 195 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 ITGA5P08648 1049 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 ADORA3P0DMS8 318 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 NCK1P16333 377 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 MPGP29372 298 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 MNAT1P51948 309 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 LTBQ06643 244 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 ZNF704Q6ZNC4 412 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-203ENST00000474047 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 OR5J2Q8NH18 312 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 SLC19A3Q9BZV2 496 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 ARL8BQ9NVJ2 186 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 NDE1Q9NXR1 346 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 NOX1Q9Y5S8 564 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 PDZD2O15018 2839 aa12.52□□□□□ -0.41
VAMP4-203ENST00000474047 A0A1W2PPR1 153 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 ZNF726A6NNF4 738 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 MS4A18H0YCH9 400 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 FAM107AO95990 144 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 THY1P04216 161 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-203ENST00000474047 PUDPQ08623 228 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 ST3GAL3Q11203 375 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 MS4A18Q3C1V0 323 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 IFI44LQ53G44 452 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 HMBOX1Q6NT76 420 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 ANKS4BQ8N8V4 417 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 CCDC197Q8NCU1 140 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 GEMIN6Q8WXD5 167 aaKnown RBP12.51□□□□□ -0.41
VAMP4-203ENST00000474047 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 FNDC11Q9BVV2 318 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 EGFL7Q9UHF1 273 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 RPS6KA6Q9UK32 745 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 LOC102725191A0A1B0GVB3 256 aa12.51□□□□□ -0.41
VAMP4-203ENST00000474047 A0A1W2PR80 420 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms