RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ADRA2CP18825 462 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 NR4A1P22736 598 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 CXCR1P25024 350 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 KHKP50053 298 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 ARFIP2P53365 341 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 AQP5P55064 265 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 HOXC5Q00444 222 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 EGR4Q05215 589 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 HNRNPA0Q13151 305 aaKnown RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 DAG1Q14118 895 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 PDCD2Q16342 344 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 C1orf140Q5VVS0 124 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 FAHD2BQ6P2I3 314 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF836Q6ZNA1 936 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 ABHD12BQ7Z5M8 362 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 IFT20Q8IY31 132 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 CADM2Q8N3J6 435 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 ZDHHC22Q8N966 263 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 UBLCP1Q8WVY7 318 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 FAHD2AQ96GK7 314 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 APOPT1Q96IL0 206 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 TRNT1Q96Q11 434 aaKnown RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 LINC00470Q9BZP3 86 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 C20orf27Q9GZN8 174 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 G6PC2Q9NQR9 355 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF275Q9NSD4 429 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-209ENST00000473421 SLC6A13Q9NSD5 602 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 ASIC5Q9NY37 505 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 B3GNT2Q9NY97 397 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 REV1Q9UBZ9 1251 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 PCDHB14Q9Y5E9 798 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 PCDHGB1Q9Y5G3 927 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 WNK2Q9Y3S1 2297 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 CDHR4A6H8M9 788 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 RPL36A-HNRNPH2H7BZ11 118 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 TMPRSS2O15393 492 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 RP2O75695 350 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 AGR2O95994 175 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 SAGP10523 405 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 PNMTP11086 282 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 NAT2P11245 290 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 IL7RP16871 459 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 EPHA1P21709 976 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 IL12AP29459 219 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 CHI3L1P36222 383 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 GPR6P46095 362 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 NME5P56597 212 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 PIGFQ07326 219 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 CHI3L2Q15782 390 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 PRAMEF8Q5VWM4 474 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 PRAMEF7Q5VXH5 474 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 CMIPQ8IY22 773 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 OIT3Q8WWZ8 545 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 MRPL24Q96A35 216 aaKnown RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 SLC25A36Q96CQ1 311 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 KTI12Q96EK9 354 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 ANKRD27Q96NW4 1050 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 SLC6A7Q99884 636 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 DPY30Q9C005 99 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 MTHFD2LQ9H903 347 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF224Q9NZL3 707 aa10.82□□□□□ -0.68
TRAF4-209ENST00000473421 NOP53Q9NZM5 478 aaKnown RBP10.82□□□□□ -0.68
TRAF4-209ENST00000473421 TLDC2A0PJX2 215 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 CCDC154A6NI56 674 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 A8MVM7 634 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 SYNGR3O43761 229 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 TFPTP0C1Z6 253 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF35P13682 527 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 HLA-DOBP13765 273 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 RBMXP38159 391 aaKnown RBP10.81□□□□□ -0.68
TRAF4-209ENST00000473421 MAGEB1P43366 347 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 RPS5P46782 204 aaKnown RBP10.81□□□□□ -0.68
TRAF4-209ENST00000473421 MVDP53602 400 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 HPCAP84074 193 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 RPS26P11Q5JNZ5 115 aaPredicted RBP10.81□□□□□ -0.68
TRAF4-209ENST00000473421 PRR31Q5SQ13 230 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 AVPI1Q5T686 147 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 ATG16L1Q676U5 607 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 LRRC74BQ6ZQY2 392 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 SERPINA11Q86U17 422 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF781Q8N8C0 355 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 MNS1Q8NEH6 495 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 FGFBP3Q8TAT2 258 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF418Q8TF45 676 aaPredicted RBP10.81□□□□□ -0.68
TRAF4-209ENST00000473421 C22orf15Q8WYQ4 148 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 TSPAN32Q96QS1 320 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 OR2M2Q96R28 347 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 TMPRSS13Q9BYE2 586 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 PIF1Q9H611 641 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 MKS1Q9NXB0 559 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 MID2Q9UJV3 735 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 USP22Q9UPT9 525 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 CMAHPQ9Y471 501 aa10.81□□□□□ -0.68
TRAF4-209ENST00000473421 M0R3G1 203 aa10.8□□□□□ -0.68
TRAF4-209ENST00000473421 ZNF500O60304 480 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms