RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 C11orf94C9JXX5 98 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 LAD1O00515 517 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 MAGEB3O15480 346 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 DFNA5O60443 496 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 SNNO75324 88 aaPredicted RBP3.42□□□□□ -1.86
CLK1-209ENST00000472679 ABOP16442 354 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 PAX5Q02548 391 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 TSPO2Q5TGU0 170 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 FRMPD2BQ6IN97 320 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 GALNT17Q6IS24 598 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 ZFP2Q6ZN57 461 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 ACOT4Q8N9L9 421 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 IPMKQ8NFU5 416 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 MTMR9Q96QG7 549 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 CLCC1Q96S66 551 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 PELOQ9BRX2 385 aaKnown RBP3.42□□□□□ -1.86
CLK1-209ENST00000472679 CAPS2Q9BXY5 557 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 ZFP14Q9HCL3 533 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 KCNIP1Q9NZI2 227 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 PDS5BQ9NTI5 1447 aa3.42□□□□□ -1.86
CLK1-209ENST00000472679 MED7O43513 233 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 ICOSLGO75144 302 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 POU2F1P14859 743 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 CCR1P32246 355 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 DUSP3P51452 185 aaPredicted RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 SUCLG1P53597 346 aaKnown RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 LINC00315P59091 139 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 ACVR1Q04771 509 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 PDIA2Q13087 525 aaKnown RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 LRRC10Q5BKY1 277 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 CFAP157Q5JU67 520 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 PDZK1Q5T2W1 519 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 ATAD3BQ5T9A4 648 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 ZSCAN25Q6NSZ9 544 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 DUSP18Q8NEJ0 188 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 FAM110BQ8TC76 370 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 ACOT11Q8WXI4 607 aaPredicted RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 STARD4Q96DR4 205 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 COQ2Q96H96 371 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 RBM14Q96PK6 669 aaKnown RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 CLMPQ9H6B4 373 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 DMAP1Q9NPF5 467 aaPredicted RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 POLE4Q9NR33 117 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 STOX2Q9P2F5 926 aaPredicted RBP3.41□□□□□ -1.86
CLK1-209ENST00000472679 GNPTGQ9UJJ9 305 aa3.41□□□□□ -1.86
CLK1-209ENST00000472679 MYO10Q9HD67 2058 aa3.4□□□□□ -1.86
CLK1-209ENST00000472679 NBR2O15453 112 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 MAGEB4O15481 346 aaPredicted RBP3.4□□□□□ -1.87
CLK1-209ENST00000472679 GMFGO60234 142 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 IL12AP29459 219 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 HOXA9P31269 272 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 GRIA1P42261 906 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 IFNAR2P48551 515 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 NMUP48645 174 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 CRYBB1P53674 252 aaPredicted RBP3.4□□□□□ -1.87
CLK1-209ENST00000472679 CDK16Q00536 496 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 OR5I1Q13606 314 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
CLK1-209ENST00000472679 CYTH1Q15438 398 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 RSPO1Q2MKA7 263 aaPredicted RBP3.4□□□□□ -1.87
CLK1-209ENST00000472679 PIGGQ5H8A4 983 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 C6orf120Q7Z4R8 191 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 DHDDSQ86SQ9 333 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 THOC6Q86W42 341 aaKnown RBP3.4□□□□□ -1.87
CLK1-209ENST00000472679 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 PIANPQ8IYJ0 282 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 STEAP2Q8NFT2 490 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 OR4F15Q8NGB8 312 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 DTX3LQ8TDB6 740 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 GIMAP1Q8WWP7 306 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 RSPH1Q8WYR4 309 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 RIOK2Q9BVS4 552 aaKnown RBP3.4□□□□□ -1.87
CLK1-209ENST00000472679 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 PARD6BQ9BYG5 372 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 SLC17A9Q9BYT1 436 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 VCXQ9H320 206 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 IL26Q9NPH9 171 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 MMP17Q9ULZ9 603 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 TMCO1Q9UM00 188 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 PSG11Q9UQ72 335 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 HEBP2Q9Y5Z4 205 aa3.4□□□□□ -1.87
CLK1-209ENST00000472679 PTCH1Q13635 1447 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 IGLV4-69A0A075B6H9 119 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 IGLV3-22A0A075B6J6 115 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 H0YCG3 227 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 SCGNO76038 276 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 PTMAP06454 111 aaKnown RBP3.39□□□□□ -1.87
CLK1-209ENST00000472679 ADRB3P13945 408 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 RPS2P15880 293 aaKnown RBP3.39□□□□□ -1.87
CLK1-209ENST00000472679 OPRD1P41143 372 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 SPIBQ01892 262 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 GGTLC2Q14390 218 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 ZNF540Q8NDQ6 660 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 MAGEE2Q8TD90 523 aaPredicted RBP3.39□□□□□ -1.87
CLK1-209ENST00000472679 FGF14Q92915 247 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 CXorf40BQ96DE9 158 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 NPAS2Q99743 824 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 CDC42EP4Q9H3Q1 356 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms