RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 IGHV1-18A0A0C4DH31 117 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 GPRIN2O60269 458 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 ZNF43P17038 809 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 HTR2AP28223 471 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 AQP5P55064 265 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 CDK6Q00534 326 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 HMBOX1Q6NT76 420 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 COMTD1Q86VU5 262 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 LSMEM1Q8N8F7 131 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 KCNS3Q9BQ31 491 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 SLC52A3Q9NQ40 469 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 VAPAQ9P0L0 249 aa19.66■□□□□ 0.74
C9orf3-213ENST00000471978 A0A096LNT2 108 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 A0A096LPE4 126 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 A0A1B0GWA3 101 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 A0A1W2PPZ6 126 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 OR2T1O43869 369 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 PAX7P23759 505 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 EFNA4P52798 201 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 ROR2Q01974 943 aaKnown RBP19.65■□□□□ 0.74
C9orf3-213ENST00000471978 ANKRD16Q6P6B7 361 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 DHRS4L2Q6PKH6 230 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 C5orf46Q6UWT4 87 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 DNAJA4Q8WW22 397 aaPredicted RBP19.65■□□□□ 0.74
C9orf3-213ENST00000471978 FAM168AQ92567 244 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 SLC38A4Q969I6 547 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 TAAR8Q969N4 342 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 FBXO17Q96EF6 278 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 OXGR1Q96P68 337 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 ZNF317Q96PQ6 595 aaPredicted RBP19.65■□□□□ 0.74
C9orf3-213ENST00000471978 PRR14Q9BWN1 585 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 B3GAT1Q9P2W7 334 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 RCE1Q9Y256 329 aa19.65■□□□□ 0.74
C9orf3-213ENST00000471978 ARPC4-TTLL3A0A0A6YYG9 625 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 M0R082 166 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 AIM2O14862 343 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 TPST1O60507 370 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 FZD7O75084 574 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 ZNF432O94892 652 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 SLC25A16P16260 332 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 SH3BGRP55822 239 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-213ENST00000471978 TUBA1BP68363 451 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 TUBA4AP68366 448 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 C1DQ13901 141 aaKnown RBP19.64■□□□□ 0.73
C9orf3-213ENST00000471978 SCARB2Q14108 478 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 SWI5Q1ZZU3 235 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 MST1LQ2TV78 715 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 GLIPR1L2Q4G1C9 344 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 AGKQ53H12 422 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 ALG10BQ5I7T1 473 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 FAM69AQ5T7M9 428 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 TUBA1AQ71U36 451 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 ZNF417Q8TAU3 575 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 MAGEE2Q8TD90 523 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-213ENST00000471978 ATP6V1G3Q96LB4 118 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 TNFRSF13CQ96RJ3 184 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 ZNF587Q96SQ5 575 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-213ENST00000471978 KATNB1Q9BVA0 655 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 IKZF5Q9H5V7 419 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 GMEB1Q9Y692 573 aa19.64■□□□□ 0.73
C9orf3-213ENST00000471978 IGKV1D-42A0A075B6H8 117 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 TRAV36DV7A0A075B6V5 113 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 TRBV5-3A0A0A0MS03 114 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 A8MV72 311 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-213ENST00000471978 SLC43A1O75387 559 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 CRYAAP02489 173 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 SLC6A2P23975 617 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 GRPRP30550 384 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 NCALDP61601 193 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 IL1RL1Q01638 556 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 LOXL1Q08397 574 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-213ENST00000471978 ULK3Q6PHR2 472 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 H1FNTQ75WM6 255 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-213ENST00000471978 NET1Q7Z628 596 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-213ENST00000471978 ANKK1Q8NFD2 765 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 RNF217Q8TC41 542 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 DYDC1Q8WWB3 177 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 ZNF607Q96SK3 696 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 NELFAQ9H3P2 528 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 TMEM38AQ9H6F2 299 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-213ENST00000471978 CORO2BQ9UQ03 480 aa19.63■□□□□ 0.73
C9orf3-213ENST00000471978 PRORSD1PA6NEY8 169 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 EVPLLA8MZ36 301 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 RPL36A-HNRNPH2H7BZ11 118 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 LY6HO94772 140 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 F12P00748 615 aaPredicted RBP19.62■□□□□ 0.73
C9orf3-213ENST00000471978 HOXB1P14653 301 aaPredicted RBP19.62■□□□□ 0.73
C9orf3-213ENST00000471978 GPX2P18283 190 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 CBLP22681 906 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 ATP4BP51164 291 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 ARF1P84077 181 aaKnown RBP19.62■□□□□ 0.73
C9orf3-213ENST00000471978 SQLEQ14534 574 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 TMEM249Q2WGJ8 235 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 C3orf36Q3SXR2 165 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 FAM91A1Q658Y4 838 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 HIPK1Q86Z02 1210 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 GPR137CQ8N3F9 429 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 C10orf105Q8TEF2 133 aa19.62■□□□□ 0.73
C9orf3-213ENST00000471978 NANOS1Q8WY41 292 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms