RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, human

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUBCN-208	ENST00000471364	HSDL2	Q6YN16	418 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	CDK20	Q8IZL9	346 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	STX19	Q8N4C7	294 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	LILRB4	Q8NHJ6	448 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	C3orf49	Q96BT1	292 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	C12orf43	Q96C57	262 aa	Known RBP	11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	BPIFA2	Q96DR5	249 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	SLC38A2	Q96QD8	506 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	MYCBP	Q99417	103 aa	Predicted RBP	11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	DOK1	Q99704	481 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	RTN4R	Q9BZR6	473 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	OR52D1	Q9H346	318 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	TP63	Q9H3D4	680 aa	Predicted RBP	11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	CNOT2	Q9NZN8	540 aa	Known RBP	11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	ICAM5	Q9UMF0	924 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	CARD8	Q9Y2G2	431 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF407	Q9C0G0	2248 aa		11.45	□□□□□ -0.58
RUBCN-208	ENST00000471364	SPG11	Q96JI7	2443 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	TRBV11-1	A0A0K0K1C0	115 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	NKX2-6	A6NCS4	301 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	FAM90A27P	A6NNH2	459 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	EFCAB9	A8MZ26	197 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	FADS1	O60427	444 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	LCK	P06239	509 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	ADRA2A	P08913	450 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	CD99	P14209	185 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	ACVR2A	P27037	513 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	C21orf33	P30042	268 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	COPZ1	P61923	177 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF117	Q03924	483 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF91	Q05481	1191 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	TFF3	Q07654	80 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	TBCE	Q15813	527 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	SYT6	Q5T7P8	510 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	UBE2U	Q5VVX9	321 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	MEDAG	Q5VYS4	303 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	WBP2NL	Q6ICG8	309 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	SLC30A6	Q6NXT4	461 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	CBLN3	Q6UW01	205 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	MARCH3	Q86UD3	253 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF227	Q86WZ6	799 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	SULF2	Q8IWU5	870 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	TMCO5A	Q8N6Q1	288 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	OR13C2	Q8NGS9	318 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	NUBPL	Q8TB37	319 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	FANK1	Q8TC84	345 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF582	Q96NG8	517 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	DEFB126	Q9BYW3	111 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	PRRG3	Q9BZD7	231 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	KCNN3	Q9UGI6	736 aa		11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364	RPL36	Q9Y3U8	105 aa	Known RBP	11.44	□□□□□ -0.58
RUBCN-208	ENST00000471364		A0A087WUJ7	227 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	FAM221A	A4D161	298 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	TMEM200C	A6NKL6	621 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	KDM4E	B2RXH2	506 aa	Predicted RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	ALG1L2	C9J202	215 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364		H3BMQ9	156 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	GNB5	O14775	395 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	SURF4	O15260	269 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	EIF4E2	O60573	245 aa	Known RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	ZNF354A	O60765	605 aa	Predicted RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	PTP4A3	O75365	173 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	TRMU	O75648	421 aa	Known RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	PPM1B	O75688	479 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	TOX	O94900	526 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	RCBTB2	O95199	551 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	CH25H	O95992	272 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	HMGN1	P05114	100 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	HOXD4	P09016	255 aa	Predicted RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	DBT	P11182	482 aa	Known RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	PCSK6	P29122	969 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	GRK5	P34947	590 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	RFC3	P40938	356 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	CCR4	P51679	360 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	TMBIM6	P55061	237 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	CRYZ	Q08257	329 aa	Known RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	EFR3A	Q14156	821 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	SYT14P1	Q58G82	188 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	RPL13AP3	Q6NVV1	102 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	ARHGAP11A	Q6P4F7	1023 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	ALDH16A1	Q8IZ83	802 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	CYP4Z2P	Q8N1L4	340 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	OR2T33	Q8NG76	320 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	OR8K3	Q8NH51	312 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	FCGR1B	Q92637	280 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	YIPF6	Q96EC8	236 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	COG8	Q96MW5	612 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	KLHDC3	Q9BQ90	382 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	TMUB1	Q9BVT8	246 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	FUNDC2	Q9BWH2	189 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	CDCA4	Q9BXL8	241 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	HHATL	Q9HCP6	504 aa		11.43	□□□□□ -0.58
RUBCN-208	ENST00000471364	WARS2	Q9UGM6	360 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms