RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 M0R129 80 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ACOT7O00154 380 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 EIF1AYO14602 144 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 GNGT2O14610 69 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 DNPH1O43598 174 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 OR2T1O43869 369 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 CLIC3O95833 236 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 CGAP01215 116 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 CRYABP02511 175 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 SFTPCP11686 197 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 UQCRBP14927 111 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 POU3F2P20265 443 aaPredicted RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 CRISP1P54107 249 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 CARD18P57730 90 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 NPRL3Q12980 569 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 PTGES3Q15185 160 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 HIST3H3Q16695 136 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ZIK1Q3SY52 487 aaPredicted RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 ACSF3Q4G176 576 aaPredicted RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 KRTCAP3Q53RY4 240 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 PHYHD1Q5SRE7 291 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 NCCRP1Q6ZVX7 275 aaPredicted RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 H1FNTQ75WM6 255 aaPredicted RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 IGFN1Q86VF2 1251 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 UBQLNLQ8IYU4 475 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 LNX2Q8N448 690 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 GALNT4Q8N4A0 578 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 IQCF1Q8N6M8 205 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 FAM98AQ8NCA5 519 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 OR5M9Q8NGP3 310 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 FNDC9Q8TBE3 224 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 FAM57AQ8TBR7 257 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ABHD3Q8WU67 409 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 APH1BQ8WW43 257 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 PTP4A1Q93096 173 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 DDIT4LQ96D03 193 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ZNF385AQ96PM9 386 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 RBM4BQ9BQ04 359 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 ARHGAP9Q9BRR9 750 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 RBM4Q9BWF3 364 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 HCAR1Q9BXC0 346 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 NMNAT2Q9BZQ4 307 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 OR52D1Q9H346 318 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 RNF122Q9H9V4 155 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ALKBH4Q9NXW9 302 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 AASSQ9UDR5 926 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ZNF346Q9UL40 294 aaKnown RBP8.8□□□□□ -1
SF3A1-207ENST00000471342 B3GALT5Q9Y2C3 310 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 ADAM18Q9Y3Q7 739 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 LRRC42Q9Y546 428 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 CDH10Q9Y6N8 788 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 CHD6Q8TD26 2715 aa8.8□□□□□ -1
SF3A1-207ENST00000471342 NPIPB13A6NJU9 1138 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 CD8B2A6NJW9 211 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 CLCA1A8K7I4 914 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 NPIPB4C9JG80 1138 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 SULT2B1O00204 365 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 DCTN6O00399 190 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 ARPC3O15145 178 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 SEC14L5O43304 696 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 E2F6O75461 281 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 TNFSF13O75888 250 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 AHSA1O95433 338 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 F13BP05160 661 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 PSKH1P11801 424 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 EDN3P14138 238 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 IGFBP5P24593 272 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 CEACAM8P31997 349 aaPredicted RBP8.79□□□□□ -1
SF3A1-207ENST00000471342 CDKN2AP42771 156 aaKnown RBP8.79□□□□□ -1
SF3A1-207ENST00000471342 SLC9A3P48764 834 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 ISL1P61371 349 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 FOXF2Q12947 444 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 NFATC3Q12968 1075 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 PDK3Q15120 406 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 TOMM20Q15388 145 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 MESTQ5EB52 335 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 NSUN5P2Q63ZY6 315 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 HBMQ6B0K9 141 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 ARHGAP11AQ6P4F7 1023 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 SMARCD3Q6STE5 483 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 PTCHD4Q6ZW05 846 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 CREB3L2Q70SY1 520 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 MAMDC2Q7Z304 686 aaPredicted RBP8.79□□□□□ -1
SF3A1-207ENST00000471342 OAFQ86UD1 273 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 TMEM123Q8N131 208 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 GHDCQ8N2G8 530 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 NPEPL1Q8NDH3 523 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 SMPDL3BQ92485 455 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 EME1Q96AY2 570 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 SLC25A36Q96CQ1 311 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 HRASLS5Q96KN8 279 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 Q96M85 177 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 TSPAN32Q96QS1 320 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 KLHL4Q9C0H6 718 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 BCO1Q9HAY6 547 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 CHST11Q9NPF2 352 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 NANSQ9NR45 359 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 PAPOLBQ9NRJ5 636 aaKnown RBP8.79□□□□□ -1
SF3A1-207ENST00000471342 UBAP1Q9NZ09 502 aa8.79□□□□□ -1
SF3A1-207ENST00000471342 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms