RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PRAMEF8Q5VWM4 474 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 PRAMEF7Q5VXH5 474 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 FBXW9Q5XUX1 488 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 KRT80Q6KB66 452 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-211ENST00000471260 HMGN2P46Q86SG4 172 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 RETREG3Q86VR2 466 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 SLC15A3Q8IY34 581 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 RNF148Q8N7C7 305 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 OR52P1PQ8NH57 321 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 SLC38A5Q8WUX1 472 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 AKAP1Q92667 903 aaKnown RBP eCLIP11.93□□□□□ -0.5
HMGN1-211ENST00000471260 GTF2H4Q92759 462 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 SLC35B4Q969S0 331 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 SLCO4A1Q96BD0 722 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 APH1AQ96BI3 265 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 LRRC58Q96CX6 371 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 CENPNQ96H22 339 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-211ENST00000471260 CNBD2Q96M20 576 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 OR11A1Q9GZK7 315 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 PIF1Q9H611 641 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 SLC6A13Q9NSD5 602 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-211ENST00000471260 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 UBAP1Q9NZ09 502 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 MAGEL2Q9UJ55 1249 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 MYRFQ9Y2G1 1151 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 IFT52Q9Y366 437 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 TMEM72A0PK05 275 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 AP3D1O14617 1153 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ARPC2O15144 300 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 MRPL33O75394 65 aaKnown RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 LYZL6O75951 148 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 BCHEP06276 602 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 TCN1P20061 433 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 IGHV1-2P23083 117 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 SLC6A2P23975 617 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 TTKP33981 857 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ACAA2P42765 397 aaKnown RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 OR2B6P58173 313 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 CAPRIN1Q14444 709 aaKnown RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 PPA1Q15181 289 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ATP6AP1Q15904 470 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 WBP2NLQ6ICG8 309 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 PAQR6Q6TCH4 344 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 SATL1Q86VE3 508 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF433Q8N7K0 673 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 OR9I1Q8NGQ6 314 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 LRTOMTQ8WZ04 291 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 FBXW5Q969U6 566 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 VPS33AQ96AX1 596 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 PERPQ96FX8 193 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 POM121Q96HA1 1249 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 RADILQ96JH8 1075 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 YTHDF1Q9BYJ9 559 aaKnown RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 PCDHAC1Q9H158 963 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ALG2Q9H553 416 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 BCL2L10Q9HD36 194 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 SLC52A3Q9NQ40 469 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 ASB6Q9NWX5 421 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 TAS2R16Q9NYV7 291 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 MALT1Q9UDY8 824 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 SLC9A8Q9Y2E8 581 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 PCDHB14Q9Y5E9 798 aa11.92□□□□□ -0.5
HMGN1-211ENST00000471260 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-211ENST00000471260 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
HMGN1-211ENST00000471260 A0A096LPI6 279 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 TRIM64A6NGJ6 449 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 OR5H1A6NKK0 313 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 CLIC1O00299 241 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 MYF6P23409 242 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 CXCR1P25024 350 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 ALDH3B2P48448 385 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 NFYCQ13952 458 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 RGNQ15493 299 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF672Q499Z4 452 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-211ENST00000471260 C6orf52Q5T4I8 152 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 OR7E24Q6IFN5 339 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 ALKBH2Q6NS38 261 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 HMBOX1Q6NT76 420 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 SEZ6L2Q6UXD5 910 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF836Q6ZNA1 936 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 ZBTB49Q6ZSB9 765 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 VRK2Q86Y07 508 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 UBE2J2Q8N2K1 259 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 FAM156AQ8NDB6 213 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 TSPAN14Q8NG11 270 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 LILRB1Q8NHL6 650 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-211ENST00000471260 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 Q96MF0 132 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 RDH12Q96NR8 316 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 SF3B5Q9BWJ5 86 aaKnown RBP11.91□□□□□ -0.5
HMGN1-211ENST00000471260 SPATA9Q9BWV2 254 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 PAIP1Q9H074 479 aaKnown RBP11.91□□□□□ -0.5
HMGN1-211ENST00000471260 A4GALTQ9NPC4 353 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 RLIMQ9NVW2 624 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF443Q9Y2A4 671 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms