RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 OR10C1Q96KK4 312 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 RIT2Q99578 217 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 ECSITQ9BQ95 431 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 NIPSNAP3BQ9BS92 247 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 FICDQ9BVA6 458 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 MRPL13Q9BYD1 178 aaKnown RBP0.65□□□□□ -2.31
UBXN4-207ENST00000471246 ZFP14Q9HCL3 533 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 TM9SF3Q9HD45 589 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 SLCO1B3Q9NPD5 702 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 NGBQ9NPG2 151 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 SLC17A5Q9NRA2 495 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 SEC14L3Q9UDX4 400 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 COPS3Q9UNS2 423 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 GSTK1Q9Y2Q3 226 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 RFNGQ9Y644 331 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 ITGB4P16144 1822 aa0.65□□□□□ -2.31
UBXN4-207ENST00000471246 DHX57Q6P158 1386 aaKnown RBP0.65□□□□□ -2.31
UBXN4-207ENST00000471246 BAHCC1Q9P281 2608 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 IGHV5-51A0A0C4DH38 117 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 RNF103-CHMP3A0A140T963 221 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 A0A1W2PP18 115 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PRSS37A4D1T9 235 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 C12orf71A8MTZ7 269 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 NPIPA7E9PJI5 369 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 LOC110117498-PIK3R3F6TDL0 507 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 INS-IGF2F8WCM5 200 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 SLC31A2O15432 143 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 TAPBPO15533 448 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ZSCAN12O43309 604 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 UGT1A9O60656 530 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 SRP72O76094 671 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 VAMP5O95183 116 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MPZL1O95297 269 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PTBP3O95758 552 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 IGHG4P01861 327 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ADRA2AP08913 450 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ZDHHC11BP0C7U3 371 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 NPIPA8P0DM63 369 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PNMTP11086 282 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 HPGDP15428 266 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ABOP16442 354 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PSMC3P17980 439 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 TCN2P20062 427 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 OMGP23515 440 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 DNAJB1P25685 340 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 GYG1P46976 350 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 CAMLGP49069 296 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PKNOX1P55347 436 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MICBQ29980 383 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 COA6Q5JTJ3 125 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MARCH8Q5T0T0 291 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 FBXW9Q5XUX1 488 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 TPGS2Q68CL5 300 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 OR52E8Q6IFG1 317 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 LCN12Q6JVE5 192 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 AFTPHQ6ULP2 937 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 CES3Q6UWW8 571 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 FAM92BQ6ZTR7 304 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PGAP1Q75T13 922 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 NLRP9Q7RTR0 991 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MOB3BQ86TA1 216 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ACOT1Q86TX2 421 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 GRAMD2AQ8IUY3 354 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 UBALD2Q8IYN6 164 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF679Q8IYX0 411 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 CLEC4FQ8N1N0 589 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 C15orf56Q8N910 161 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 OR1N2Q8NGR9 330 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 OR2G3Q8NGZ4 309 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 OR5W2Q8NH69 310 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ACOT11Q8WXI4 607 aaPredicted RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ESR2Q92731 530 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 LRRC58Q96CX6 371 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 PDXPQ96GD0 296 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 FAM111AQ96PZ2 611 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 OR2A5Q96R48 311 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 KCNK16Q96T55 309 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MRPL45Q9BRJ2 306 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 ACTR6Q9GZN1 396 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 DPH5Q9H2P9 285 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 RBKSQ9H477 322 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 RPP21Q9H633 154 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 RANBP3Q9H6Z4 567 aaPredicted RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MEAF6Q9HAF1 191 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 POPDC2Q9HBU9 364 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 WFDC1Q9HC57 220 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 CTPS2Q9NRF8 586 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 GLRX2Q9NS18 164 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 KCNIP1Q9NZI2 227 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MOSPD1Q9UJG1 213 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 NPIPA1Q9UND3 350 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MRPS33Q9Y291 106 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 RPL36Q9Y3U8 105 aaKnown RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 CARMIL3Q8ND23 1372 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 NCAPD2Q15021 1401 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 NFASCO94856 1347 aa0.64□□□□□ -2.31
UBXN4-207ENST00000471246 MN1Q10571 1320 aaPredicted RBP0.64□□□□□ -2.31
UBXN4-207ENST00000471246 USP9XQ93008 2570 aaPredicted RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 IGKV3D-11A0A0A0MRZ8 115 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 TRIM64A6NGJ6 449 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms