RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 HIST1H2ACQ93077 130 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 MUL1Q969V5 352 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 C1GALT1C1Q96EU7 318 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SH3YL1Q96HL8 342 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 LRR1Q96L50 414 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 AGAP4Q96P64 663 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 IL4I1Q96RQ9 567 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 PLA2G12AQ9BZM1 189 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 EGLN3Q9H6Z9 239 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 MCCC2Q9HCC0 563 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 TIMMDC1Q9NPL8 285 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 RASSF1Q9NS23 344 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 MRPL39Q9NYK5 338 aaKnown RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HAO2Q9NYQ3 351 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 TVP23BQ9NYZ1 205 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 WARS2Q9UGM6 360 aaKnown RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 DIMT1Q9UNQ2 313 aaKnown RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 TMED7Q9Y3B3 224 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HDGFL3Q9Y3E1 203 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SCN2AQ99250 2005 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 GJE1A6NN92 205 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 TLX2O43763 284 aaPredicted RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 TRIM3O75382 744 aaPredicted RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 CBR3O75828 277 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 SEC14L2O76054 403 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 FADS2O95864 444 aaKnown RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 IGHMP01871 453 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 BGLAPP02818 100 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 P04436 131 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 CD14P08571 375 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 HTR1AP08908 422 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ATXN8OSP0DMR3 200 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 FUT1P19526 365 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 PCMT1P22061 227 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 FMO3P31513 532 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 MTNR1AP48039 350 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 FXYD6P3P58550 94 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF91Q05481 1191 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ZP4Q12836 540 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 FHL1Q13642 323 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 IRF3Q14653 427 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 SLC35D3Q5M8T2 416 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 SYT6Q5T7P8 510 aaPredicted RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ABHD17BQ5VST6 288 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 C1orf140Q5VVS0 124 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 C1QL3Q5VWW1 255 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 TIGD3Q6B0B8 471 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 XAF1Q6GPH4 301 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 KCTD8Q6ZWB6 473 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF367Q7RTV3 350 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 NANOGNBQ7Z5D8 188 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ADGRG3Q86Y34 549 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 STX19Q8N4C7 294 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 TCEANCQ8N8B7 351 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 OR13F1Q8NGS4 319 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 OR13C2Q8NGS9 318 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 PSMF1Q92530 271 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 RORBQ92753 470 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 SAMD8Q96LT4 415 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF582Q96NG8 517 aaPredicted RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 MESP1Q9BRJ9 268 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 IFT27Q9BW83 186 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ASPNQ9BXN1 380 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 RTN4RQ9BZR6 473 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 RBM38Q9H0Z9 239 aaKnown RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 CDCP1Q9H5V8 836 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF552Q9H707 407 aaPredicted RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 FGF20Q9NP95 211 aaPredicted RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 CHST11Q9NPF2 352 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 TRAPPC4Q9Y296 219 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 B3GALT5Q9Y2C3 310 aa8.26□□□□□ -1.09
PTPRE-207ENST00000471218 EXOSC1Q9Y3B2 195 aaKnown RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 TNRC6AQ8NDV7 1962 aaKnown RBP8.26□□□□□ -1.09
PTPRE-207ENST00000471218 LOC102725191A0A1B0GVB3 256 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 FTCDNL1E5RQL4 147 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 KPNA4O00629 521 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 XPNPEP2O43895 674 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PRKYO43930 277 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ENTPD6O75354 484 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 CH25HO95992 272 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 DBTP11182 482 aaKnown RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ACVR2AP27037 513 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 SDHAP31040 664 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 SRD5A2P31213 254 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PTGER4P35408 488 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 BLVRAP53004 296 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 SLC25A1P53007 311 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 TMBIM6P55061 237 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 LGALS3BPQ08380 585 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 Q0VFX4 171 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ST3GAL4Q11206 333 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 GGTLC2Q14390 218 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PRR30Q53SZ7 412 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 LCN1P1Q5VSP4 162 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 TMEM236Q5W0B7 351 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 SP5Q6BEB4 398 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 RPUSD3Q6P087 351 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms