RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 GPR52Q9Y2T5 361 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 CHD3Q12873 2000 aaKnown RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 USF3Q68DE3 2245 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 ROS1P08922 2347 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 SHISA8B8ZZ34 492 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 RNF223E7ERA6 249 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 GNGT2O14610 69 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 CLOCKO15516 846 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 FRS3O43559 492 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 BCAS1O75363 584 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 CYP7B1O75881 506 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 OR5F1O95221 314 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 DANCRP0C864 163 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 THRBP10828 461 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 AGTR1P30556 359 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 RNF144AP50876 292 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 P2RX1P51575 399 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 SMIM11AP58511 58 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 TAS2R41P59536 307 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 RAC1P63000 192 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF117Q03924 483 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 SLC34A1Q06495 639 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 EPS8Q12929 822 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 NPTX1Q15818 432 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 CLEC12BQ2HXU8 276 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 DNM1P46Q6ZS02 220 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 ESPNLQ6ZVH7 1005 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 TSEN54Q7Z6J9 526 aaKnown RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 STK32CQ86UX6 486 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 WFDC8Q8IUA0 241 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 RBM45Q8IUH3 476 aaKnown RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 OFCC1Q8IZS5 231 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 TMCO5AQ8N6Q1 288 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 LSMEM1Q8N8F7 131 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 OR5W2Q8NH69 310 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 OR2V1Q8NHB1 315 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 LILRB1Q8NHL6 650 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 B4GALNT2Q8NHY0 566 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 LRTOMTQ8WZ04 291 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 AKAP1Q92667 903 aaKnown RBP eCLIP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 ZBTB8AQ96BR9 441 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 CENPNQ96H22 339 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-206ENST00000471037 MCHR1Q99705 422 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 PKP2Q99959 881 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 WFDC6Q9BQY6 131 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 REG4Q9BYZ8 158 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 TRIM2Q9C040 744 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 ANKRD19PQ9H560 264 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 REEP1Q9H902 201 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 RIMS3Q9UJD0 308 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 CLEC4AQ9UMR7 237 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 A4GNTQ9UNA3 340 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 LAMP3Q9UQV4 416 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 VDAC3Q9Y277 283 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 CARD8Q9Y2G2 431 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 RNF115Q9Y4L5 304 aa8.05□□□□□ -1.12
SF3A1-206ENST00000471037 TRAPPC13A5PLN9 417 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 OIP5O43482 229 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 TLX2O43763 284 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 CXCL13O43927 109 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 TPST2O60704 377 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 DIRAS1O95057 198 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 PRSS23O95084 383 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SYNGR4O95473 234 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SOD3P08294 240 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 GKN3PP0CG01 181 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 PRG2P13727 222 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 PGCP20142 388 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 HTR2AP28223 471 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 RRM2P31350 389 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 IDUAP35475 653 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 ACAA2P42765 397 aaKnown RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 CCR4P51679 360 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 COPZ1P61923 177 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SPIBQ01892 262 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 ST3GAL3Q11203 375 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 CBFBQ13951 182 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 OR1Q1Q15612 314 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 NDUFAF6Q330K2 333 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 ENTPD8Q5MY95 495 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 NCMAPQ5T1S8 102 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 HMBOX1Q6NT76 420 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 PPP4R4Q6NUP7 873 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF613Q6PF04 617 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 CBLN3Q6UW01 205 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 LILRA2Q8N149 483 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 GABRG1Q8N1C3 465 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 PIK3C3Q8NEB9 887 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 STEAP2Q8NFT2 490 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 ADAMTS16Q8TE57 1224 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 NANOS1Q8WY41 292 aaKnown RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 FBXW5Q969U6 566 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 TRMT61AQ96FX7 289 aaKnown RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SH3YL1Q96HL8 342 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 DHRS1Q96LJ7 313 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 EPYCQ99645 322 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 TACO1Q9BSH4 297 aaKnown RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 FNDC11Q9BVV2 318 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms