RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 TUBA1BP68363 451 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 TUBA4AP68366 448 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 SLC9B1Q4ZJI4 515 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 PDCD4Q53EL6 469 aaKnown RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 WBP2NLQ6ICG8 309 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 ZNF621Q6ZSS3 439 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 CREB3L2Q70SY1 520 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 TUBA1AQ71U36 451 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 LINC01356Q8N9X3 169 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 MAGEE2Q8TD90 523 aaPredicted RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 HPS1Q92902 700 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 CCDC115Q96NT0 180 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 ANKRD27Q96NW4 1050 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 CCDC28BQ9BUN5 200 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 WDR55Q9H6Y2 383 aaPredicted RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 DYNLRB1Q9NP97 96 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 SLCO1B3Q9NPD5 702 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 SDR39U1Q9NRG7 319 aaPredicted RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 CALML5Q9NZT1 146 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 ZIM2Q9NZV7 527 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 CRNNQ9UBG3 495 aaPredicted RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 TMEFF2Q9UIK5 374 aaPredicted RBP12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 RASD1Q9Y272 281 aa12.05□□□□□ -0.48
SEMA3F-208ENST00000470737 A0A096LPE4 126 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 A0A096LPI6 279 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 LRP5LA4QPB2 252 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 NR5A2O00482 541 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 FRS3O43559 492 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 KRT75O95678 551 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 GKN3PP0CG01 181 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 NPR2P20594 1047 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 RPS4Y1P22090 263 aaKnown RBP12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 BNIP2Q12982 314 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 C1orf140Q5VVS0 124 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 SPATA21Q7Z572 469 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 FAM169BQ8N8A8 192 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 NUP37Q8NFH4 326 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 OR52P1PQ8NH57 321 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 PNPT1Q8TCS8 783 aaKnown RBP12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 SIKE1Q9BRV8 207 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 LINC00470Q9BZP3 86 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 ARMC7Q9H6L4 198 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 P2RX2Q9UBL9 471 aa12.04□□□□□ -0.48
SEMA3F-208ENST00000470737 CDHR4A6H8M9 788 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 UBDO15205 165 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 AHSA1O95433 338 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 IL6P05231 212 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 TACSTD2P09758 323 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 IFNGR1P15260 489 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 ZNF43P17038 809 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 GIFP27352 417 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 CALCRP30988 508 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 CAPZA2P47755 286 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 NME5P56597 212 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 LGALS3BPQ08380 585 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 LARS2Q15031 903 aaKnown RBP12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 ADRM1Q16186 407 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 HSP90B2PQ58FF3 399 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 C12orf54Q6X4T0 127 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 ZNF836Q6ZNA1 936 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 MSANTD1Q6ZTZ1 278 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 LSRQ86X29 649 aaPredicted RBP12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 SVOPLQ8N434 492 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 SLC25A36Q96CQ1 311 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 OR52B2Q96RD2 323 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 OR52E6Q96RD3 313 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 SNX18Q96RF0 628 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 SOX7Q9BT81 388 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 TCF7L2Q9NQB0 619 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 RLIMQ9NVW2 624 aa12.03□□□□□ -0.48
SEMA3F-208ENST00000470737 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 TMEM247A6NEH6 219 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 AKAP8O43823 692 aaKnown RBP12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 EDF1O60869 148 aaKnown RBP12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 SLC43A1O75387 559 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 UPK3AO75631 287 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 IGKV3-15P01624 115 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 IGLV1-44P01699 117 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 GSNP06396 782 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 TFPTP0C1Z6 253 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 CBR1P16152 277 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 ITGA2P17301 1181 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 THBS4P35443 961 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 CRISP3P54108 245 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 CLDN17P56750 224 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 UFM1P61960 85 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 NPRL3Q12980 569 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 VRK2Q86Y07 508 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 ZNF786Q8N393 782 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
SEMA3F-208ENST00000470737 STK35Q8TDR2 534 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms