RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PAK1IP1Q9NWT1 392 aaPredicted RBP4.55□□□□□ -1.68
RBM39-227ENST00000470563 USE1Q9NZ43 259 aa4.55□□□□□ -1.68
RBM39-227ENST00000470563 WWOXQ9NZC7 414 aa4.55□□□□□ -1.68
RBM39-227ENST00000470563 ERVW-1Q9UQF0 538 aa4.55□□□□□ -1.68
RBM39-227ENST00000470563 NYNRINQ9P2P1 1898 aaKnown RBP4.55□□□□□ -1.68
RBM39-227ENST00000470563 ZNF106Q9H2Y7 1883 aaKnown RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 A0A0J9YYE9 177 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 EVPLLA8MZ36 301 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 NR5A2O00482 541 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ACOX3O15254 700 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 IDH3BO43837 385 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 GMNNO75496 209 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 EEDO75530 441 aaKnown RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 PTTG1O95997 202 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 FHP07954 510 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 GSTT2P0CG29 244 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 GSTT2BP0CG30 244 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CXCL8P10145 99 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 THRBP10828 461 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 IMPDH1P20839 514 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ATP6V1B2P21281 511 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 MAT2AP31153 395 aaKnown RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 RPL9P32969 192 aaKnown RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 CXCR4P61073 352 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 NME3Q13232 169 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 SELPLGQ14242 412 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ZNF181Q2M3W8 571 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 WSCD2Q2TBF2 565 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 KRTAP24-1Q3LI83 254 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CYBRD1Q53TN4 286 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 FAM182AQ5T1J6 154 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 RIPPLY2Q5TAB7 128 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 DDI2Q5TDH0 399 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 PLEKHG7Q6ZR37 379 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 TMEM26Q6ZUK4 368 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 PAQR9Q6ZVX9 377 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ARMCX2Q7L311 632 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CENPLQ8N0S6 344 aaPredicted RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 OR52K1Q8NGK4 314 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 RPLP0P6Q8NHW5 317 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 SPPL2AQ8TCT8 520 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CANT1Q8WVQ1 401 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CYGBQ8WWM9 190 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 LIPHQ8WWY8 451 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 NT5C3BQ969T7 300 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 C19orf60Q96EN9 201 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ZNF486Q96H40 463 aaPredicted RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 SH3YL1Q96HL8 342 aaPredicted RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 PCED1BQ96HM7 432 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ZBED3Q96IU2 234 aaPredicted RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 CPB2Q96IY4 423 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ELMO2Q96JJ3 720 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 GLT1D1Q96MS3 346 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CCDC115Q96NT0 180 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 RBM4BQ9BQ04 359 aaKnown RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 DCUN1D5Q9BTE7 237 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 FICDQ9BVA6 458 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 UGT2B28Q9BY64 529 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ING2Q9H160 280 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ABCG4Q9H172 646 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 POMKQ9H5K3 350 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 RPAP3Q9H6T3 665 aaPredicted RBP4.54□□□□□ -1.68
RBM39-227ENST00000470563 NANOGQ9H9S0 305 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 TMEM165Q9HC07 324 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 TM9SF3Q9HD45 589 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 DIABLOQ9NR28 239 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 HOXC10Q9NYD6 342 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 GTSE1Q9NYZ3 720 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 COPS7AQ9UBW8 275 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 IL20RAQ9UHF4 553 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 C3orf18Q9UK00 162 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 LRP12Q9Y561 859 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 ORC6Q9Y5N6 252 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 AP1M2Q9Y6Q5 423 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 CHD5Q8TDI0 1954 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 PLXNA3P51805 1871 aa4.54□□□□□ -1.68
RBM39-227ENST00000470563 OTOFQ9HC10 1997 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 C1orf232A0A0U1RR37 186 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 PNMA8CA0A1B0GUJ8 204 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 A0A1W2PP18 115 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 A8MT66 165 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ZNF99A8MXY4 864 aaPredicted RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 EI24O14681 340 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 SNX4O95219 450 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 KRT6AP02538 564 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 RPLP0P05388 317 aaKnown RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 TRAPPC2P0DI81 140 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 TRAPPC2BP0DI82 140 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 TCN1P20061 433 aaPredicted RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 CRHBPP24387 322 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 CCNCP24863 283 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 UGT2B10P36537 528 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 HPCAL1P37235 193 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 OPRL1P41146 370 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 GRIA1P42261 906 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 SULT1E1P49888 294 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 DEFA1P59665 94 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 DEFA3P59666 94 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ARPC4P59998 168 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 SNRPD1P62314 119 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms