RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 IL5P05113 134 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 SPI1P17947 270 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 S100A11P31949 105 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 IGFALSP35858 605 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 ACAA2P42765 397 aaKnown RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TAS2R20P59543 309 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 MRPS10P82664 201 aaKnown RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 CBFBQ13951 182 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 PDGFRLQ15198 375 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 PRICKLE4Q2TBC4 344 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 HAVCR1Q96D42 359 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TM4SF19Q96DZ7 209 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 OR1F2PQ96R84 312 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TRIM2Q9C040 744 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TBC1D29Q9UFV1 150 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 PFDN2Q9UHV9 154 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 MRPS2Q9Y399 296 aaKnown RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 OR6C68A6NDL8 312 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 OR6C65A6NJZ3 312 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 FAM171A2A8MVW0 826 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 ATP6V1G2-DDX39BF2Z307 99 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 LGALS8O00214 317 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 KCNJ13O60928 360 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 SIX6O95475 246 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 HIST1H2ABP04908 130 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 LPLP06858 475 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 SEC61A1P61619 476 aaKnown RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 OC90Q02509 493 aaPredicted RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 ZCCHC12Q6PEW1 402 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 STAC2Q6ZMT1 411 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 HIST3H2AQ7L7L0 130 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 SLC35F3Q8IY50 421 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 NPEPL1Q8NDH3 523 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 HIST1H2ACQ93077 130 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 RASD2Q96D21 266 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 SGTBQ96EQ0 304 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 ZNF578Q96N58 590 aaPredicted RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 UTP23Q9BRU9 249 aaKnown RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 SEMA4CQ9C0C4 833 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TRPV4Q9HBA0 871 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 TCF7L1Q9HCS4 588 aa12.05□□□□□ -0.48
SFXN3-205ENST00000470252 DNAJB12Q9NXW2 375 aaKnown RBP12.05□□□□□ -0.48
SFXN3-205ENST00000470252 FXYD6-FXYD2A0A087WZ82 144 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 A0A1B0GTQ1 180 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 PRR32B1ATL7 298 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 PYCARD-AS1I3L0S3 204 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 TMIGD3P0DMS9 266 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 CALCBP10092 127 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 ZNF10P21506 573 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 KIRREL2Q6UWL6 708 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 ABHD13Q7L211 337 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 C12orf76Q8N812 135 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 OR5T3Q8NGG3 340 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 OR5M1Q8NGP8 315 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 MIB2Q96AX9 1013 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 APOOQ9BUR5 198 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 FXYD6Q9H0Q3 95 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 TTYH1Q9H313 450 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 FGF22Q9HCT0 170 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 MKKSQ9NPJ1 570 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 ZC4H2Q9NQZ6 224 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 DPP7Q9UHL4 492 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 B3GALNT1O75752 331 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 GPR75O95800 540 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 VSIG10L2P0DP72 767 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 MAP3K8P41279 467 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 SOX2P48431 317 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 OVCH2Q7RTZ1 564 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 DNAAF1Q8NEP3 725 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 ZDHHC1Q8WTX9 485 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 SHARPINQ9H0F6 387 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 ARL6Q9H0F7 186 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 RSPH9Q9H1X1 276 aaPredicted RBP12.04□□□□□ -0.48
SFXN3-205ENST00000470252 MED9Q9NWA0 146 aa12.04□□□□□ -0.48
SFXN3-205ENST00000470252 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 SNAPC5O75971 98 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 EN2P19622 333 aaPredicted RBP12.03□□□□□ -0.48
SFXN3-205ENST00000470252 ITPKBP27987 946 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 MECP2P51608 486 aaKnown RBP12.03□□□□□ -0.48
SFXN3-205ENST00000470252 DLX5P56178 289 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 ERVK-25P63136 954 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 RPS21P63220 83 aaKnown RBP12.03□□□□□ -0.48
SFXN3-205ENST00000470252 HTRA4P83105 476 aaPredicted RBP12.03□□□□□ -0.48
SFXN3-205ENST00000470252 MGAT2Q10469 447 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 NDUFAF6Q330K2 333 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 ULK3Q6PHR2 472 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 LINC00114Q6XXX2 140 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 DPY19L2P2Q6ZN68 376 aa12.03□□□□□ -0.48
SFXN3-205ENST00000470252 OR52R1Q8NGF1 315 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms