RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SLC9B1Q4ZJI4 515 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 DCAF12L2Q5VW00 463 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 PRAMEF8Q5VWM4 474 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 PRAMEF7Q5VXH5 474 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 KANK2Q63ZY3 851 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 ACSM5Q6NUN0 579 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 ANKRD46Q86W74 232 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 C10orf107Q8IVU9 208 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 CADM2Q8N3J6 435 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 FNDC5Q8NAU1 212 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 ACMSDQ8TDX5 336 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 SLC25A36Q96CQ1 311 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 COQ8BQ96D53 544 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 ZNF837Q96EG3 531 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-204ENST00000470191 SF3B5Q9BWJ5 86 aaKnown RBP7.83□□□□□ -1.16
CCDC171-204ENST00000470191 GATA5Q9BWX5 397 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-204ENST00000470191 RACGAP1Q9H0H5 632 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 TSPYL1Q9H0U9 437 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 ZNF665Q9H7R5 613 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 G6PC2Q9NQR9 355 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 PSMC3IPQ9P2W1 217 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-204ENST00000470191 DUSP13Q9UII6 198 aa7.83□□□□□ -1.16
CCDC171-204ENST00000470191 A0A0G2JMP0 313 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 A0A0X1KG70 313 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 A0A1W2PPW3 197 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 SMIM23A6NLE4 172 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 TMEM229AB2RXF0 380 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 HLA-HP01893 362 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 C1QCP02747 245 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 GKN3PP0CG01 181 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 ANPEPP15144 967 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 NR4A1P22736 598 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 FPR2P25090 351 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 ARR3P36575 388 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 MAGEB1P43366 347 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 SYPL1Q16563 259 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 CEACAM16Q2WEN9 425 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 C3orf36Q3SXR2 165 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 CCDC153Q494R4 210 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 GLIPR1L2Q4G1C9 344 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 GKAP1Q5VSY0 366 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-204ENST00000470191 CARD17Q5XLA6 110 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 ATG16L1Q676U5 607 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 RBMS3Q6XE24 437 aaKnown RBP7.82□□□□□ -1.16
CCDC171-204ENST00000470191 EPHX4Q8IUS5 362 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 GPR137CQ8N3F9 429 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 TEX29Q8N6K0 151 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 LRRC17Q8N6Y2 441 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 OR4M2Q8NGB6 313 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 NANPQ8TBE9 248 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 RNF217Q8TC41 542 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 MAGEE2Q8TD90 523 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-204ENST00000470191 BOD1Q96IK1 185 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 PPP3R2Q96LZ3 170 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 C3orf30Q96M34 536 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 MS4A5Q9H3V2 200 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 GPR35Q9HC97 309 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 SLC52A3Q9NQ40 469 aa7.82□□□□□ -1.16
CCDC171-204ENST00000470191 EXOSC3Q9NQT5 275 aaKnown RBP7.82□□□□□ -1.16
CCDC171-204ENST00000470191 PRAMEF27A3QJZ7 478 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 CFAP73A6NFT4 308 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 DNAJC9-AS1A6NH13 148 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 RIPK2O43353 540 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 TPD52L2O43399 206 aaKnown RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 FRS3O43559 492 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 SLC43A1O75387 559 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 LYPLA1O75608 230 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 ZNF432O94892 652 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 G6PDP11413 515 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 PRPS1L1P21108 318 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 PAX7P23759 505 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 ECHS1P30084 290 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 CHI3L1P36222 383 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 SH3BGRP55822 239 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 TMEM33P57088 247 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 ETF1P62495 437 aaKnown RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 CCL8P80075 99 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 LCN2P80188 198 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 CKAP4Q07065 602 aaKnown RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 PCLAFQ15004 111 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 NKPD1Q17RQ9 610 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 TRMT5Q32P41 509 aaKnown RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 UGT3A2Q3SY77 523 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 C6orf136Q5SQH8 315 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 MRPL2Q5T653 305 aaKnown RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 BLOC1S3Q6QNY0 202 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 ZNF572Q7Z3I7 529 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-204ENST00000470191 RIMKLAQ8IXN7 391 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 NATD1Q8N6N6 113 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 ANKFN1Q8N957 763 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 MZB1Q8WU39 189 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 PPP1R36Q96LQ0 422 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 ZNF416Q9BWM5 594 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 DPY30Q9C005 99 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 OR51B6Q9H340 312 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 C7orf69Q9H7B7 122 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 SEC14L4Q9UDX3 406 aa7.81□□□□□ -1.16
CCDC171-204ENST00000470191 M0R3G1 203 aa7.8□□□□□ -1.16
CCDC171-204ENST00000470191 COPEO14579 308 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms