RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 VBP1P61758 197 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 FOXK1P85037 733 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 DCAF10Q5QP82 559 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 LEG1Q6P5S2 330 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 JAZF1Q86VZ6 243 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 OR51L1Q8NGJ5 315 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 ZNF417Q8TAU3 575 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 TSPAN32Q96QS1 320 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 ZNF587Q96SQ5 575 aaPredicted RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 BCL7BQ9BQE9 202 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 RIF1Q5UIP0 2472 aaKnown RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 TMEM129A0AVI4 362 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 FTCDNL1E5RQL4 147 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 CCRL2O00421 344 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 RNF13O43567 381 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 PLGP00747 810 aaPredicted RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 SCG5P05408 212 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 ZNF182P17025 639 aaPredicted RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 CDKN2AP42771 156 aaKnown RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 NCS1P62166 190 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 TMED1Q13445 227 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 OR7A5Q15622 319 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 GNRHR2Q96P88 292 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 TBX5Q99593 518 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 TMEM185BQ9H7F4 350 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 RYDENQ9NUL5 291 aaKnown RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 ASB6Q9NWX5 421 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 ERVK13-1Q9NX77 482 aa16.37■□□□□ 0.21
SMC4-211ENST00000469858 CNOT1A5YKK6 2376 aaKnown RBP16.37■□□□□ 0.21
SMC4-211ENST00000469858 C12orf71A8MTZ7 269 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 J3QRE1 110 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 SNPHO15079 494 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 AIREO43918 545 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 OR6A2O95222 327 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 CEACAM1P13688 526 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 GTF2E2P29084 291 aaKnown RBP16.36■□□□□ 0.21
SMC4-211ENST00000469858 CD79BP40259 229 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 SH3BGRP55822 239 aaPredicted RBP16.36■□□□□ 0.21
SMC4-211ENST00000469858 KRR1Q13601 381 aaKnown RBP16.36■□□□□ 0.21
SMC4-211ENST00000469858 SSX1Q16384 188 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 C3orf33Q6P1S2 294 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 DTX1Q86Y01 620 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 TMEM99Q8N816 258 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 OR1J4Q8NGS1 313 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 GATAD2BQ8WXI9 593 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 KIAA1143Q96AT1 154 aaPredicted RBP16.36■□□□□ 0.21
SMC4-211ENST00000469858 ZMYND19Q96E35 227 aaPredicted RBP16.36■□□□□ 0.21
SMC4-211ENST00000469858 DDOQ99489 341 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 RACGAP1Q9H0H5 632 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 SERINC1Q9NRX5 453 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 INIPQ9NRY2 104 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 ZNF346Q9UL40 294 aaKnown RBP16.36■□□□□ 0.21
SMC4-211ENST00000469858 ZNF292O60281 2723 aa16.36■□□□□ 0.21
SMC4-211ENST00000469858 SLC22A1O15245 554 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 DXOO77932 396 aaKnown RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 TXNDC12O95881 172 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 F10P00742 488 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 P04436 131 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 SBK2P0C263 348 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 LIFP15018 202 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ITGA3P26006 1051 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 IDUAP35475 653 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 CLK1P49759 484 aaKnown RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 MAP2K6P52564 334 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 OC90Q02509 493 aaPredicted RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 MLLT11Q13015 90 aaPredicted RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 MESTQ5EB52 335 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ASCL5Q7RTU5 278 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ACBD7Q8N6N7 88 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 OR10H4Q8NGA5 316 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 OR6S1Q8NH40 331 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 MFSD8Q8NHS3 518 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 OR51E2Q9H255 320 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ADGRL4Q9HBW9 690 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ASCL3Q9NQ33 180 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 RPRD1BQ9NQG5 326 aaKnown RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 MRPL39Q9NYK5 338 aaKnown RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 STMN3Q9NZ72 180 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 RPH3AQ9Y2J0 694 aaPredicted RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 ZFHX2Q9C0A1 2572 aaPredicted RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 ANKRD33BA6NCL7 494 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 H7C1C5 153 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 PLPP3O14495 311 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 TM4SF5O14894 197 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 BCL10O95999 233 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 OPN1LWP04000 364 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 IMPDH2P12268 514 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 SPI1P17947 270 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 DPP4P27487 766 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 EIF1P41567 113 aaKnown RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 DNASE1L1P49184 302 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 CYB561P49447 251 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 LCN6P62502 163 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 LGALS3BPQ08380 585 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 GLYR1Q49A26 553 aaPredicted RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 EMC4Q5J8M3 183 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 GPR139Q6DWJ6 353 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 JMJD6Q6NYC1 403 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms