RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 VWA1Q6PCB0 445 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 TMPRSS11FQ6ZWK6 438 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 H1FNTQ75WM6 255 aaPredicted RBP13.16□□□□□ -0.3
COL9A3-209ENST00000469852 RRM2BQ7LG56 351 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 LIX1LQ8IVB5 337 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 WDFY1Q8IWB7 410 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 OR13C2Q8NGS9 318 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 OR5J2Q8NH18 312 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 MOSPD2Q8NHP6 518 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 LIPHQ8WWY8 451 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
COL9A3-209ENST00000469852 ASPNQ9BXN1 380 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 SEMA6AQ9H2E6 1030 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 C6orf203Q9P0P8 240 aaPredicted RBP13.16□□□□□ -0.3
COL9A3-209ENST00000469852 RNF6Q9Y252 685 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 SLC5A6Q9Y289 635 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 CORINQ9Y5Q5 1042 aa13.16□□□□□ -0.3
COL9A3-209ENST00000469852 A0A1W2PNV4 684 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 EFCAB9A8MZ26 197 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ZG16O60844 167 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 SS18L1O75177 396 aaPredicted RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 DEAF1O75398 565 aaPredicted RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 TNFSF13O75888 250 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 GASTP01350 101 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 IL2RAP01589 272 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 TSPAN19P0C672 248 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 SAGP10523 405 aaPredicted RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 PRKACGP22612 351 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 AGTR1P30556 359 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 DNAJA1P31689 397 aaKnown RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 UQCRC1P31930 480 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 KIR2DL2P43627 348 aaPredicted RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 PER3P56645 1201 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 FXYD6P3P58550 94 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 MFSD13AQ14CX5 517 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 C1orf94Q6P1W5 598 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ZFP1Q6P2D0 407 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 NHLRC1Q6VVB1 395 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 NUFIP2Q7Z417 695 aaKnown RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 NANOGNBQ7Z5D8 188 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 GPAT4Q86UL3 456 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 EPHX4Q8IUS5 362 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 SLC43A2Q8N370 569 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ZIC4Q8N9L1 334 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 SCAIQ8N9R8 606 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 OR10G2Q8NGC3 310 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 RND1Q92730 232 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 GMPPAQ96IJ6 420 aaPredicted RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
COL9A3-209ENST00000469852 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
COL9A3-209ENST00000469852 IGKV3D-15A0A087WSY6 115 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 C11orf98E9PRG8 122 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 BLOC1S5-TXNDC5H3BN57 136 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 E2F6O75461 281 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 PLGP00747 810 aaPredicted RBP13.14□□□□□ -0.31
COL9A3-209ENST00000469852 ADORA3P0DMS8 318 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 POU2F1P14859 743 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 AQP2P41181 271 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 GSSP48637 474 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 SLC16A1P53985 500 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 RPS4XP62701 263 aaKnown RBP13.14□□□□□ -0.31
COL9A3-209ENST00000469852 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
COL9A3-209ENST00000469852 PUDPQ08623 228 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 PDK3Q15120 406 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 RNPS1Q15287 305 aaKnown RBP13.14□□□□□ -0.31
COL9A3-209ENST00000469852 TMEM225Q6GV28 225 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 OR2A2Q6IF42 318 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 MCEMP1Q8IX19 187 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 CNEP1R1Q8N9A8 125 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 AQP11Q8NBQ7 271 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 OR9K2Q8NGE7 335 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 GIPC3Q8TF64 312 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 NIPSNAP1Q9BPW8 284 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 ENKD1Q9H0I2 346 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 MCCC2Q9HCC0 563 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 PDP1Q9P0J1 537 aaPredicted RBP13.14□□□□□ -0.31
COL9A3-209ENST00000469852 KLHL9Q9P2J3 617 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 RASD1Q9Y272 281 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 SIGLEC7Q9Y286 467 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 TMEM5Q9Y2B1 443 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 FLVCR1Q9Y5Y0 555 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 FREM1Q5H8C1 2179 aa13.14□□□□□ -0.31
COL9A3-209ENST00000469852 UNC119BA6NIH7 251 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 HSPB2A8KAH6 182 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 TRAF3IP2O43734 574 aaPredicted RBP13.13□□□□□ -0.31
COL9A3-209ENST00000469852 PTP4A3O75365 173 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 SERPINI2O75830 405 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 F13BP05160 661 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 YES1P07947 543 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 FCGR1AP12314 374 aa13.13□□□□□ -0.31
COL9A3-209ENST00000469852 AHCYP23526 432 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms