RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 A0A1W2PR64 198 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 A0A1W2PRV1 198 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 MAGEB17A8MXT2 336 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 NDUFS8O00217 210 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 EEF1E1O43324 174 aaKnown RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 ZNF682O95780 498 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 DRD1P21728 446 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 OC90Q02509 493 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 CDKN3Q16667 212 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ARTNQ5T4W7 220 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 B3GNTL1Q67FW5 361 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 ZNF660Q6AZW8 331 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 DPPA4Q7L190 304 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 TMEM200AQ86VY9 491 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 C17orf64Q86WR6 236 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 LRRC28Q86X40 367 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 ZFAND4Q86XD8 727 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 GJD3Q8N144 294 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 OR10A7Q8NGE5 316 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 EXTL1Q92935 676 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 HIST1H2BAQ96A08 127 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ISG20Q96AZ6 181 aaKnown RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 ARSGQ96EG1 525 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ATOH8Q96SQ7 321 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 OR51V1Q9H2C8 321 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 PIGMQ9H3S5 423 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 GSTO2Q9H4Y5 243 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 TRPC4Q9UBN4 977 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 GDF2Q9UK05 429 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 MRPS17Q9Y2R5 130 aaKnown RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 CHST2Q9Y4C5 530 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 A6NLC8 198 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 CASKO14936 926 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 PRKNO60260 465 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 CA11O75493 328 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ADH1BP00325 375 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 PDYNP01213 254 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 IGHV2-5P01817 119 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ZP1P60852 638 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 C14orf28Q4W4Y0 310 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 PLA1AQ53H76 456 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ARSJQ5FYB0 599 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 TMEM91Q6ZNR0 172 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 NAXDQ8IW45 347 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 RAB42Q8N4Z0 105 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 CCDC115Q96NT0 180 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 SIGLEC11Q96RL6 698 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ADAM19Q9H013 955 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ZNF726A6NNF4 738 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 GFRA2O00451 464 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 NDUFS4O43181 175 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 TGOLN2O43493 480 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 EML2O95834 649 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 CRYABP02511 175 aaKnown RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 HPXP02790 462 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 SHC1P29353 583 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 THBS2P35442 1172 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 DCDP81605 110 aaKnown RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 MC1RQ01726 317 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 HSPB3Q12988 150 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 ZNF630Q2M218 657 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 SBSNQ6UWP8 590 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 WDR88Q6ZMY6 472 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 LANCL3Q6ZV70 420 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 LARP4Q71RC2 724 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP50-214ENST00000469163 WDR53Q7Z5U6 358 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 OR10A6Q8NH74 314 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 C1GALT1C1Q96EU7 318 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 NDUFAF3Q9BU61 184 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 PPP1R3EQ9H7J1 279 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 CACYBPQ9HB71 228 aaKnown RBP9.17□□□□□ -0.94
NUP50-214ENST00000469163 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 HRASLS2Q9NWW9 162 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 MS4A12Q9NXJ0 267 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 TAS2R10Q9NYW0 307 aa9.17□□□□□ -0.94
NUP50-214ENST00000469163 NYNRINQ9P2P1 1898 aaKnown RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 A0A1W2PQF6 199 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 PRKYO43930 277 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 OR10H3O60404 316 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 EBLN1P0CF75 366 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 ACHEP22303 614 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 SSR2P43308 183 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 KIR2DL1P43626 348 aaPredicted RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 CXCL12P48061 93 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 HCCSP53701 268 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 SEC61A1P61619 476 aaKnown RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 KIAA0141Q14154 515 aaPredicted RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 HENMT1Q5T8I9 393 aaKnown RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 RIPPLY2Q5TAB7 128 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 NUDT10Q8NFP7 164 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 OR1N1Q8NGS0 311 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 ZNF480Q8WV37 535 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 MED12Q93074 2177 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 OR52E6Q96RD3 313 aa9.16□□□□□ -0.94
NUP50-214ENST00000469163 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
NUP50-214ENST00000469163 POLR2J2Q9GZM3 115 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms