RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GPR137CQ8N3F9 429 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 RYBPQ8N488 228 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PRR18Q8N4B5 295 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 UBAC2Q8NBM4 344 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 AQP11Q8NBQ7 271 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 REPS2Q8NFH8 660 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR7G2Q8NG99 324 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR2AP1Q8NGE2 309 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR2D3Q8NGH3 330 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR10R2Q8NGX6 335 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR6N1Q8NGY5 312 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 OR4L1Q8NH43 312 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MRGPRDQ8TDS7 321 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SNX33Q8WV41 574 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TNFAIP8L1Q8WVP5 186 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 BRI3BPQ8WY22 251 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 C22orf15Q8WYQ4 148 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 HSD17B8Q92506 261 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 THRSPQ92748 146 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TAAR8Q969N4 342 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 HAVCR1Q96D42 359 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 VWCEQ96DN2 955 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 S100A16Q96FQ6 103 aaKnown RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 BSCL2Q96G97 398 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PEX11GQ96HA9 241 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 RCC1LQ96I51 464 aaKnown RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 MRGPRX4Q96LA9 322 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF582Q96NG8 517 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CAMK1GQ96NX5 476 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 IL4I1Q96RQ9 567 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 LMF1Q96S06 567 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ABHD1Q96SE0 405 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 STACQ99469 402 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NIPSNAP1Q9BPW8 284 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ACBD6Q9BR61 282 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF2Q9BSG1 426 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CHIAQ9BZP6 476 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PRDM14Q9GZV8 571 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 POLR2J3Q9H1A7 115 aaKnown RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TLNRD1Q9H1K6 362 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PCED1AQ9H1Q7 454 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NKX2-4Q9H2Z4 354 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PTGES2Q9H7Z7 377 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TPT1P8Q9HAU6 139 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM27Q9HBJ8 222 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SPACA1Q9HBV2 294 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SIRT7Q9NRC8 400 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 UBQLN4Q9NRR5 601 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CUTCQ9NTM9 273 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SEMA4GQ9NTN9 838 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ELOVL2Q9NXB9 296 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TAS2R10Q9NYW0 307 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CFAP97Q9P2B7 532 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 NCDNQ9UBB6 729 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GALPQ9UBC7 116 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TBC1D29Q9UFV1 150 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 CLEC2DQ9UHP7 191 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 SIX4Q9UIU6 781 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF225Q9UK10 706 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GABRQQ9UN88 632 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 TNFSF18Q9UNG2 199 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 WASF3Q9UPY6 502 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 GPR55Q9Y2T6 319 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-207ENST00000468925 RAI2Q9Y5P3 530 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 PTGDR2Q9Y5Y4 395 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 ETV7Q9Y603 341 aa4.47□□□□□ -1.69
SF3B1-207ENST00000468925 A0A087WWC5 75 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CCDC187A0A096LP49 1063 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 A0A0G2JLL6 359 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM269A0A1B0GVZ9 245 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 GXYLT2A0PJZ3 443 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SMCO3A2RU48 225 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR5H15A6NDH6 313 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 A6NIZ1 184 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR5H1A6NKK0 313 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR52A4PA6NMU1 304 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 HEPACAM2A8MVW5 462 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 A8MWP6 167 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RNASEK-C17orf49H0YIS7 233 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 H3BN98 237 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 H7BY64 318 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 K7ERQ8 282 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RTCAO00442 366 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MANBAO00462 879 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RNASET2O00584 256 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ARPC1BO15143 372 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MAGEB4O15481 346 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RNF13O43567 381 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PLPP2O43688 288 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 NCR1O76036 304 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 DFFBO76075 338 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 AKR7A3O95154 331 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CLDN9O95484 217 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 C22orf31O95567 290 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SLC25A27O95847 323 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 C6orf47O95873 294 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MT-ND5P03915 603 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 HLA-DQB2P05538 268 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms