RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	SSX8	Q7RTT4	187 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	NUFIP2	Q7Z417	695 aa	Known RBP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZAR1	Q86SH2	424 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	TUSC5	Q8IXB3	177 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	GATS	Q8NAP1	163 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	GPR32P1	Q8NGA4	272 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	PYDC1	Q8WXC3	89 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	GEMIN6	Q8WXD5	167 aa	Known RBP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZG16B	Q96DA0	208 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	SLC47A1	Q96FL8	570 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	HSH2D	Q96JZ2	352 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	RHNO1	Q9BSD3	238 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	RNPEPL1	Q9HAU8	725 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	IL1RAP	Q9NPH3	570 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	STX18	Q9P2W9	335 aa	Known RBP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	KCNE5	Q9UJ90	142 aa		13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	GDF2	Q9UK05	429 aa	Predicted RBP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TSSC4-208	ENST00000467308		A0A1W2PQD3	144 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	DPRX	A6NFQ7	191 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	GJE1	A6NN92	205 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	KRT36	O76013	467 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	LGI1	O95970	557 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ADA	P00813	363 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	FCGR1A	P12314	374 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	HPGD	P15428	266 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	GPR68	Q15743	365 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	IFI44L	Q53G44	452 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	KLHL26	Q53HC5	615 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZNF311	Q5JNZ3	666 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	C6orf52	Q5T4I8	152 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	FKBP9P1	Q75LS8	142 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	OLIG3	Q7RTU3	272 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ATG4D	Q86TL0	474 aa	Predicted RBP	13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZNF527	Q8NB42	609 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	B4GALNT2	Q8NHY0	566 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	PROX1	Q92786	737 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	C7orf34	Q96L11	122 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	CHID1	Q9BWS9	393 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	SRXN1	Q9BYN0	137 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ARMC7	Q9H6L4	198 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	TMEM160	Q9NX00	188 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	CISD1	Q9NZ45	108 aa	Known RBP	13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	PRDM4	Q9UKN5	801 aa		13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.9	□□□□□ -0.18
TSSC4-208	ENST00000467308		A0A096LNT2	108 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZNF814	B7Z6K7	855 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	SCD	O00767	359 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	NTN1	O95631	604 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	ATP6V1G2	O95670	118 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	OPN1SW	P03999	348 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	YES1	P07947	543 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	IL7R	P16871	459 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	SHC1	P29353	583 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	SFTPD	P35247	375 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	ERF	P50548	548 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	DSCR9	P59020	149 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	RCN1	Q15293	331 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	MAPK14	Q16539	360 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	IQCC	Q4KMZ1	466 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308		Q6ZT83	130 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	FCRLA	Q7L513	359 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	VTCN1	Q7Z7D3	282 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	SLC43A2	Q8N370	569 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	SMYD1	Q8NB12	490 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	OR10H5	Q8NGA6	315 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	TPD52L3	Q96J77	140 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	QRSL1	Q9H0R6	528 aa	Known RBP	13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	AURKC	Q9UQB9	309 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	CHST2	Q9Y4C5	530 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	DTNA	Q9Y4J8	743 aa		13.89	□□□□□ -0.19
TSSC4-208	ENST00000467308	IGHV4-30-2	A0A087WSY4	118 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	CDHR4	A6H8M9	788 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	SHISA9	B4DS77	424 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	SSX4	O60224	188 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	GPRIN2	O60269	458 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	TPST1	O60507	370 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	RAMP1	O60894	148 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	ANPEP	P15144	967 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	ITGA2	P17301	1181 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	FOXF1	Q12946	379 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	TMEM249	Q2WGJ8	235 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	AGAP6	Q5VW22	663 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	VRK2	Q86Y07	508 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	RADIL	Q96JH8	1075 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	ADAD1	Q96M93	576 aa	Known RBP	13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	TNFRSF13C	Q96RJ3	184 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	SEPHS2	Q99611	448 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	ARHGDIG	Q99819	225 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	KLHDC3	Q9BQ90	382 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	BCO1	Q9HAY6	547 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	B3GALT5	Q9Y2C3	310 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	SLC35A3	Q9Y2D2	325 aa		13.88	□□□□□ -0.19
TSSC4-208	ENST00000467308	SLC9A8	Q9Y2E8	581 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms