RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 LEPP41159 167 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 PRKXP51817 358 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 IL24Q13007 206 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 CHIT1Q13231 466 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 C1orf61Q13536 156 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 GANABQ14697 944 aaKnown RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 ARL6IP1Q15041 203 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 TMEM225Q6GV28 225 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 NANOGP8Q6NSW7 305 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 ACOT7LQ6ZUV0 252 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 TPRA1Q86W33 373 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 SVOPLQ8N434 492 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 KIR3DL3Q8N743 410 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 CATSPER1Q8NEC5 780 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 OR4D9Q8NGE8 314 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 NPAS2Q99743 824 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 TUBGCP2Q9BSJ2 902 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 NAT10Q9H0A0 1025 aaKnown RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 NT5C3AQ9H0P0 336 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 NXF5Q9H1B4 397 aaKnown RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 CDC42EP4Q9H3Q1 356 aaKnown RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 ZNF430Q9H8G1 570 aaPredicted RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 GORASP2Q9H8Y8 452 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 WARS2Q9UGM6 360 aaKnown RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 TRAPPC4Q9Y296 219 aa2.13□□□□□ -2.07
ATG3-204ENST00000467275 PHF3Q92576 2039 aaKnown RBP2.13□□□□□ -2.07
ATG3-204ENST00000467275 LRP5LA4QPB2 252 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 METTL21EPA6NDL7 271 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 VSTM2BA6NLU5 285 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 GPR89AB7ZAQ6 455 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 KIF2AO00139 706 aaPredicted RBP2.12□□□□□ -2.07
ATG3-204ENST00000467275 RS1O15537 224 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 CXCL13O43927 109 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 SNNO75324 88 aaPredicted RBP2.12□□□□□ -2.07
ATG3-204ENST00000467275 LRATO95237 230 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 CAPN1P07384 714 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 CISD3P0C7P0 127 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 GPR89BP0CG08 455 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 MUC1P15941 1255 aaPredicted RBP2.12□□□□□ -2.07
ATG3-204ENST00000467275 NPY1RP25929 384 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 PRPHP41219 470 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 CASP4P49662 377 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 ACTR1AP61163 376 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 UBE2HP62256 183 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 PDK3Q15120 406 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 UBE2SQ16763 222 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 TP53I3Q53FA7 332 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 C1orf100Q5SVJ3 147 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 BEND3Q5T5X7 828 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 KCNIP4Q6PIL6 250 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 BRD3OSQ6XYD6 125 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 Q6ZPB1 254 aaPredicted RBP2.12□□□□□ -2.07
ATG3-204ENST00000467275 PCP2Q8IVA1 136 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 SLC38A6Q8IZM9 456 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 TMEM123Q8N131 208 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 CLEC4FQ8N1N0 589 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 FANK1Q8TC84 345 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 ACER1Q8TDN7 264 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 MRPS31Q92665 395 aaKnown RBP2.12□□□□□ -2.07
ATG3-204ENST00000467275 SMARCD2Q92925 531 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 COQ2Q96H96 371 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 EDEM2Q9BV94 578 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 SIRT7Q9NRC8 400 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 IL36GQ9NZH8 169 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 EXTL2Q9UBQ6 330 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 POLDIP2Q9Y2S7 368 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 MEMO1Q9Y316 297 aa2.12□□□□□ -2.07
ATG3-204ENST00000467275 C15orf38-AP3S2A0A0A6YYH1 394 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 ZNF233A6NK53 670 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 TRDCB7Z8K6 153 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 F5H6K3 240 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 CXCL11O14625 94 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 MTX2O75431 263 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 GNA14O95837 355 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 PNMTP11086 282 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 CALB2P22676 271 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 FGF9P31371 208 aaPredicted RBP2.11□□□□□ -2.07
ATG3-204ENST00000467275 YWHABP31946 246 aaKnown RBP2.11□□□□□ -2.07
ATG3-204ENST00000467275 GRIA1P42261 906 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 DAP3P51398 398 aaKnown RBP2.11□□□□□ -2.07
ATG3-204ENST00000467275 KLRC3Q07444 240 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 EXOC3L2Q2M3D2 409 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 LRRC23Q53EV4 343 aaPredicted RBP2.11□□□□□ -2.07
ATG3-204ENST00000467275 TPGS2Q68CL5 300 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 CASC1Q6TDU7 716 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 CCDC80Q76M96 950 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 VSTM4Q8IW00 320 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 OR2L13Q8N349 312 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 OR56B4Q8NH76 319 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 SLC41A3Q96GZ6 507 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 TIMD4Q96H15 378 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 TAAR1Q96RJ0 339 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 CCNL2Q96S94 520 aaPredicted RBP2.11□□□□□ -2.07
ATG3-204ENST00000467275 HIST1H4GQ99525 98 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 ULBP2Q9BZM5 246 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 LRRN3Q9H3W5 708 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 SMYD3Q9H7B4 428 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 TIMM10BQ9Y5J6 103 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 PLA2R1Q13018 1463 aa2.11□□□□□ -2.07
ATG3-204ENST00000467275 ATAD2BQ9ULI0 1458 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms