RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 HIST1H2AGP0C0S8 130 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 CTSEP14091 401 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 GDF1P27539 372 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 CD82P27701 267 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 LONP1P36776 959 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 RABIFP47224 123 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 CCL11P51671 97 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 SSTP61278 116 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 RPS24P62847 133 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 RPS21P63220 83 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 CXCL6P80162 114 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 HMGN5P82970 282 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 PAX2Q02962 417 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 CYP24A1Q07973 514 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 WASHC5Q12768 1159 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 KLF5Q13887 457 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 PDK1Q15118 436 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 CARTPTQ16568 116 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 PPP1R3AQ16821 1122 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 DEFB109BQ30KR1 87 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 PIP5KL1Q5T9C9 394 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 DDI2Q5TDH0 399 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 SPOPLQ6IQ16 392 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 RHBDD2Q6NTF9 364 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 NEK5Q6P3R8 708 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 CENPQQ7L2Z9 268 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 UNC93AQ86WB7 457 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 HORMAD1Q86X24 394 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 CCDC65Q8IXS2 484 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 LINC00518Q8N0U6 118 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 OR8H1Q8NGG4 311 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 RDH11Q8TC12 318 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 FBXO25Q8TCJ0 367 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 VN1R17PQ8TDU5 208 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 PDCD6IPQ8WUM4 868 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 SLC13A3Q8WWT9 602 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 OR8D1Q8WZ84 308 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 HIST1H2ACQ93077 130 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 CCDC47Q96A33 483 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 FAM131CQ96AQ9 280 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 KIAA1143Q96AT1 154 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 DNAJC19Q96DA6 116 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 NUS1Q96E22 293 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 BMFQ96LC9 184 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 COQ7Q99807 217 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 SPXQ9BT56 116 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 XPO4Q9C0E2 1151 aaKnown RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 ABCG8Q9H221 673 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 LRRN3Q9H3W5 708 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 GPN2Q9H9Y4 310 aaPredicted RBP2.37□□□□□ -2.03
XRN1-206ENST00000467077 TAS2R16Q9NYV7 291 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 SENP1Q9P0U3 644 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 KCNN3Q9UGI6 736 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 STOML2Q9UJZ1 356 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 ENTPD4Q9Y227 616 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 DOCK4Q8N1I0 1966 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 AHCTF1Q8WYP5 2266 aa2.37□□□□□ -2.03
XRN1-206ENST00000467077 APCP25054 2843 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 SHANK1Q9Y566 2161 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 NF1P21359 2839 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 LRRIQ3A6PVS8 624 aaPredicted RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 MKRN2OSH3BPM6 223 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 H3BQV1 296 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TNFSF11O14788 317 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ALOX15BO15296 676 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 RAD51BO15315 384 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 DUX1O43812 170 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 RAD1O60671 282 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 IGLV3-27P01718 113 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 CTSLP07711 333 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ALPIP09923 528 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 CCL4P13236 92 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 PGAM2P15259 253 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 UGT1A3P35503 534 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 SLC25A1P53007 311 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 AP3M2P53677 418 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ADIGQ0VDE8 80 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 CDC20Q12834 499 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 C16orf72Q14CZ0 275 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ELOCQ15369 112 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 CLPPQ16740 277 aaPredicted RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 KRTAP21-3Q3LHN1 58 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 MS4A13Q5J8X5 152 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TCHHL1Q5QJ38 904 aaPredicted RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 MFSD7Q6UXD7 560 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 WDR88Q6ZMY6 472 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ASRGL1Q7L266 308 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TAF8Q7Z7C8 310 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 YRDCQ86U90 279 aaKnown RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 SLC22A16Q86VW1 577 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 GKN2Q86XP6 184 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 NELFCDQ8IXH7 590 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ZNF671Q8TAW3 534 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 UBA3Q8TBC4 463 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TAF4BQ92750 862 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ART4Q93070 314 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TMEM186Q96B77 213 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 KLF6Q99612 283 aaPredicted RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 MAPKAP1Q9BPZ7 522 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms