RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 MT-ND1P03886 318 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 IFI30P13284 250 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 ZNF43P17038 809 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 FUT4P22083 530 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 AHCYP23526 432 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 ERFP50548 548 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 SLC16A1P53985 500 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 CHRNB3Q05901 458 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 FAM27E3Q08E93 113 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 FLOT2Q14254 428 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 ZNF74Q16587 644 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
UBA3-209ENST00000466763 PGM2L1Q6PCE3 622 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 ZNF474Q6S9Z5 364 aaPredicted RBP12.33□□□□□ -0.44
UBA3-209ENST00000466763 BEND4Q6ZU67 534 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 TSEN54Q7Z6J9 526 aaKnown RBP12.33□□□□□ -0.44
UBA3-209ENST00000466763 SPATA24Q86W54 205 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 KIF18BQ86Y91 864 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 OR5J2Q8NH18 312 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 OR6S1Q8NH40 331 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 PIP5K1AQ99755 562 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 SF3B5Q9BWJ5 86 aaKnown RBP12.33□□□□□ -0.44
UBA3-209ENST00000466763 FANCFQ9NPI8 374 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 PRSS50Q9UI38 385 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 AURKCQ9UQB9 309 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 B3GALT5Q9Y2C3 310 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 FLVCR1Q9Y5Y0 555 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 PKDREJQ9NTG1 2253 aa12.33□□□□□ -0.44
UBA3-209ENST00000466763 TCRBV5S2A0A599 114 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 ACOT8O14734 319 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 OR7A10O76100 309 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 FUT1P19526 365 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 CD79BP40259 229 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 P2RY4P51582 365 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 SMIM11AP58511 58 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 FBXL19-AS1Q494R0 122 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 TBPL2Q6SJ96 375 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 TFAP2EQ6VUC0 442 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 AAED1Q7RTV5 226 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 MEX3DQ86XN8 651 aaKnown RBP12.32□□□□□ -0.44
UBA3-209ENST00000466763 NRMQ8IXM6 262 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 ACOT11Q8WXI4 607 aaPredicted RBP12.32□□□□□ -0.44
UBA3-209ENST00000466763 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 OXGR1Q96P68 337 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 ZNF385AQ96PM9 386 aaKnown RBP12.32□□□□□ -0.44
UBA3-209ENST00000466763 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 FKRPQ9H9S5 495 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 IL1RAPQ9NPH3 570 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 MAN2C1Q9NTJ4 1040 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 C20orf141Q9NUB4 165 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 PARPBPQ9NWS1 579 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 MRPL39Q9NYK5 338 aaKnown RBP12.32□□□□□ -0.44
UBA3-209ENST00000466763 ELOVL5Q9NYP7 299 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 POMPQ9Y244 141 aa12.32□□□□□ -0.44
UBA3-209ENST00000466763 A0A087WUU8 490 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 MS4A18H0YCH9 400 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 BLOC1S5-TXNDC5H3BN57 136 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 PLPP3O14495 311 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 RNF13O43567 381 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 PRSS23O95084 383 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 GADD45GO95257 159 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 SEMG1P04279 462 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 SAGP10523 405 aaPredicted RBP12.31□□□□□ -0.44
UBA3-209ENST00000466763 EDNRAP25101 427 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 RRM2P31350 389 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 OR3A2P47893 321 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 CLDN17P56750 224 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 PUDPQ08623 228 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 MS4A18Q3C1V0 323 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 ANKRD34AQ69YU3 496 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 ZNF787Q6DD87 383 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 NIPAL3Q6P499 406 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 PODNL1Q6PEZ8 512 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 CREB3L2Q70SY1 520 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 SLC46A3Q7Z3Q1 461 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 UEVLDQ8IX04 471 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 SCAIQ8N9R8 606 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 POP5Q969H6 163 aaKnown RBP12.31□□□□□ -0.44
UBA3-209ENST00000466763 BPIFA2Q96DR5 249 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 ZNF347Q96SE7 839 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 LRMDAQ9H2I8 198 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.31□□□□□ -0.44
UBA3-209ENST00000466763 UPB1Q9UBR1 384 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 SLC7A8Q9UHI5 535 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 ZNF229Q9UJW7 825 aa12.31□□□□□ -0.44
UBA3-209ENST00000466763 TRBV4-1A0A0J9YWV2 114 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 C16orf97H3BN30 126 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 CIB2O75838 187 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 KRT33AO76009 404 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 HPRP00739 348 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 ADAP00813 363 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 HLA-DOBP13765 273 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 NTF4P34130 210 aa12.3□□□□□ -0.44
UBA3-209ENST00000466763 KIR2DL3P43628 341 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms