RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 IDH3AP50213 366 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 EFNA4P52798 201 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 TUBA1BP68363 451 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 TUBA4AP68366 448 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 LGALS3BPQ08380 585 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 SCARB2Q14108 478 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 CHRFAM7AQ494W8 412 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 FAM69AQ5T7M9 428 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 C11orf71Q6IPW1 123 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 ANKRD16Q6P6B7 361 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 TUBA1AQ71U36 451 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 RANBP3LQ86VV4 465 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 PIK3C3Q8NEB9 887 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 BHLHE22Q8NFJ8 381 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 KTI12Q96EK9 354 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 SLC47A1Q96FL8 570 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 OXGR1Q96P68 337 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 ZNF317Q96PQ6 595 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 CCDC28BQ9BUN5 200 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 ASPNQ9BXN1 380 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 ANGPT4Q9Y264 503 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 TRAV36DV7A0A075B6V5 113 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 A0A1B0GWA3 101 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 TMEM229AB2RXF0 380 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 M0R082 166 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 UPK3AO75631 287 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 ARAFP10398 606 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 SERPINF1P36955 418 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 SQLEQ14534 574 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 CYP51A1Q16850 503 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 ULK3Q6PHR2 472 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 BLOC1S3Q6QNY0 202 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 ARMC8Q8IUR7 673 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 EPHX4Q8IUS5 362 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 UEVLDQ8IX04 471 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 ZNF417Q8TAU3 575 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 ZNF587Q96SQ5 575 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-206ENST00000466591 KCNK17Q96T54 332 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 EBF4Q9BQW3 602 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 KATNB1Q9BVA0 655 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 C12orf10Q9HB07 376 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 SLCO1B3Q9NPD5 702 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 B3GAT2Q9NPZ5 323 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 TESQ9UGI8 421 aaKnown RBP15.3■□□□□ 0.04
COL7A1-206ENST00000466591 RCE1Q9Y256 329 aa15.3■□□□□ 0.04
COL7A1-206ENST00000466591 IGHV1-18A0A0C4DH31 117 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 ANGPT2O15123 496 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 BMP2P12643 396 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 GRPRP30550 384 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 PDLIM4P50479 330 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 NPRL3Q12980 569 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 MFSD13AQ14CX5 517 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 CARD17Q5XLA6 110 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 PODNL1Q6PEZ8 512 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 H1FNTQ75WM6 255 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-206ENST00000466591 NET1Q7Z628 596 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-206ENST00000466591 ATP6V1G3Q96LB4 118 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 TNFRSF13CQ96RJ3 184 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 PIMREGQ9BSJ6 248 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 LINC00470Q9BZP3 86 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 CA10Q9NS85 328 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 CHST2Q9Y4C5 530 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 CADP27708 2225 aa15.29■□□□□ 0.04
COL7A1-206ENST00000466591 ZNF726A6NNF4 738 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 M0R3G1 203 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 GPRIN2O60269 458 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 NPIPB7O75200 414 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 SERPINI2O75830 405 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 OR6A2O95222 327 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 IDH3GP51553 393 aaPredicted RBP15.28■□□□□ 0.04
COL7A1-206ENST00000466591 ARF1P84077 181 aaKnown RBP15.28■□□□□ 0.04
COL7A1-206ENST00000466591 KRTAP1-1Q07627 177 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 GGTLC2Q14390 218 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 TMEM249Q2WGJ8 235 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 IQCCQ4KMZ1 466 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 LRIF1Q5T3J3 769 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 FAM91A1Q658Y4 838 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 CYB5R2Q6BCY4 276 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 DNM1P46Q6ZS02 220 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 SNX32Q86XE0 403 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 HIPK4Q8NE63 616 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 OR10H5Q8NGA6 315 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 OR4F15Q8NGB8 312 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 SLC26A7Q8TE54 656 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 PROX1Q92786 737 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 BCL2L2Q92843 193 aaPredicted RBP15.28■□□□□ 0.04
COL7A1-206ENST00000466591 TAAR8Q969N4 342 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 CRLF2Q9HC73 371 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 INTS9Q9NV88 658 aaKnown RBP15.28■□□□□ 0.04
COL7A1-206ENST00000466591 SLC25A37Q9NYZ2 338 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 VAPAQ9P0L0 249 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 TRIM33Q9UPN9 1127 aa15.28■□□□□ 0.04
COL7A1-206ENST00000466591 CSPG4Q6UVK1 2322 aa15.27■□□□□ 0.04
COL7A1-206ENST00000466591 ARPC4-TTLL3A0A0A6YYG9 625 aa15.27■□□□□ 0.04
COL7A1-206ENST00000466591 B9A039 149 aa15.27■□□□□ 0.04
COL7A1-206ENST00000466591 FTCDNL1E5RQL4 147 aa15.27■□□□□ 0.04
COL7A1-206ENST00000466591 F12P00748 615 aaPredicted RBP15.27■□□□□ 0.04
COL7A1-206ENST00000466591 OR4A8P0C604 315 aa15.27■□□□□ 0.04
COL7A1-206ENST00000466591 HOXB1P14653 301 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms